Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p15f
         (561 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q478A8 Cluster: Extracellular ligand-binding receptor p...    34   2.6  
UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_A7TDX1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A3LSI8 Cluster: Predicted protein; n=2; Saccharomycetac...    33   6.0  
UniRef50_UPI00006CA6A1 Cluster: Acyltransferase family protein; ...    32   8.0  

>UniRef50_Q478A8 Cluster: Extracellular ligand-binding receptor
           precursor; n=3; Rhodocyclaceae|Rep: Extracellular
           ligand-binding receptor precursor - Dechloromonas
           aromatica (strain RCB)
          Length = 379

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 269 PEKNRFLYIPINTGFLRFTFTVHTSATRSNIQATNIKKTVFQNQITV 409
           PEKN F  +P   G  +  + +   AT       NIKK + +N++ V
Sbjct: 39  PEKNTFALLPTTIGGQKVNYIILDDATDPTAATKNIKKLISENKVDV 85


>UniRef50_A5K729 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4216

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 14/64 (21%), Positives = 32/64 (50%)
 Frame = +2

Query: 257  VRRKPEKNRFLYIPINTGFLRFTFTVHTSATRSNIQATNIKKTVFQNQITVHYI*KLQCN 436
            ++RK   N  + +PI       ++ V  +   +N + T+I+    +++ +V  +  L CN
Sbjct: 3581 IKRKKINNNLVLVPIQVCIFNLSYRVKKNENNANNKITSIESIEAKDKCSVQNLINLHCN 3640

Query: 437  NHNM 448
             H++
Sbjct: 3641 LHDL 3644


>UniRef50_A7TDX1 Cluster: Putative uncharacterized protein; n=1;
            Vanderwaltozyma polyspora DSM 70294|Rep: Putative
            uncharacterized protein - Vanderwaltozyma polyspora DSM
            70294
          Length = 2475

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = +2

Query: 308  GFLRFTFTVHTSATRSNIQATNIKKTVFQNQITVHYI*KLQCN----NHNMVGRLLAYEM 475
            G L  T TV++  T        +K T + N+  +H + +L+ N    NH +     + E 
Sbjct: 1722 GSLLRTNTVNSFVTMRRASTMAVKST-YDNKFLIHNV-QLRLNKKIRNHLLEYASSSAER 1779

Query: 476  RTVTQISTYLHMLSAKEMVHRELGNL 553
            ++V+  STY  +L AKE++   L N+
Sbjct: 1780 KSVSFFSTYKSILIAKELLCHSLSNV 1805


>UniRef50_A3LSI8 Cluster: Predicted protein; n=2;
           Saccharomycetaceae|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 677

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
 Frame = +2

Query: 383 TVFQNQITVHYI*KLQCNNHNMVGRLLAYEMR---TVTQISTYLHMLSAKEMVHRELGNL 553
           ++ + Q+T+H++ +L  N ++ + RL+ YE      +T+I+    +LSAK   + E  NL
Sbjct: 262 SISREQLTIHFMTRLTSNFNSNLNRLVGYESEFDSLLTKITHLEDILSAKSNPNLEERNL 321

Query: 554 L 556
           L
Sbjct: 322 L 322


>UniRef50_UPI00006CA6A1 Cluster: Acyltransferase family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Acyltransferase
           family protein - Tetrahymena thermophila SB210
          Length = 815

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +3

Query: 72  DSSVCSNATCVWTYFTAVSVLSMCASLVVSLLVEMPFCSLLRRVCDR--AAR*QTPTEAR 245
           DS   +N   +  Y T + V ++  SL+  +L+E PF +L   + +R  A++ Q   E R
Sbjct: 621 DSLYVNNENILQLYSTEL-VFTLSLSLLFVILIEQPFTNLANIIFNRQKASKQQIAAEIR 679

Query: 246 DVNRFEENRRK 278
           + N+ E  + K
Sbjct: 680 NSNQIEYRKSK 690


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,258,750
Number of Sequences: 1657284
Number of extensions: 9544313
Number of successful extensions: 25538
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25535
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)