Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p15f
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 304 YRFFTLYIHSSHQCYQIKYTSYKYKKNRVSESN 402
           Y  F L I  S+   +I    Y+++KN ++ESN
Sbjct: 158 YPLFVLLI-VSNVVLKILVEKYRHQKNFINESN 189


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = -1

Query: 537 RCTISFADNMCRYVDIC-----VTVLISYAKSLPTILW 439
           R T+SF +N C+++  C     + +++S  + L   LW
Sbjct: 132 RYTLSFIENYCQFLYNCFHSTLLLMILSRYQRLKAQLW 169


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 13  CARARWSCTPQ 45
           C + +WS TPQ
Sbjct: 173 CPQVQWSATPQ 183


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 116 EIRPNASSVRADARVSGEQHEPGRCGVHDQRARAQ 12
           ++RP +SS+     V+ +   PG  G   Q   +Q
Sbjct: 71  DVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQ 105


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 479 TVTQISTYLHML 514
           TVT I+TYL ML
Sbjct: 394 TVTSIATYLVML 405


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 479 TVTQISTYLHML 514
           TVT I+TYL ML
Sbjct: 394 TVTSIATYLVML 405


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 116 EIRPNASSVRADARVSGEQHEPGRCGVHDQRARAQ 12
           ++RP +SS+     V+ +   PG  G   Q   +Q
Sbjct: 227 DVRPPSSSLSYGGPVNDDVRSPGTPGPLSQAPASQ 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,882
Number of Sequences: 336
Number of extensions: 2776
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)