Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p15f
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118835-1|AAM50695.1|  365|Drosophila melanogaster GM02889p pro...    31   1.4  
AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA...    31   1.4  
AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB...    31   1.4  
BT025844-1|ABF85744.1|  487|Drosophila melanogaster IP12417p pro...    29   4.3  
AE014296-891|AAF47928.1|  487|Drosophila melanogaster CG32238-PA...    29   4.3  
AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p pro...    28   7.5  

>AY118835-1|AAM50695.1|  365|Drosophila melanogaster GM02889p
           protein.
          Length = 365

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 501 ICTCCLQKRWCIVNW 545
           +CTC +   WCI+NW
Sbjct: 298 LCTCFMSTHWCILNW 312


>AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA,
           isoform A protein.
          Length = 386

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 501 ICTCCLQKRWCIVNW 545
           +CTC +   WCI+NW
Sbjct: 319 LCTCFMSTHWCILNW 333


>AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB,
           isoform B protein.
          Length = 365

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 501 ICTCCLQKRWCIVNW 545
           +CTC +   WCI+NW
Sbjct: 298 LCTCFMSTHWCILNW 312


>BT025844-1|ABF85744.1|  487|Drosophila melanogaster IP12417p
           protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 536 DAPSLLQTTCADMWIFASRSSFRTLKVY---QPYCGYCTVVFKCNAR*FDS 393
           D P L+     D+ ++   +SFR LK Y   Q +C +CTV +  +    D+
Sbjct: 260 DNPLLIGGKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVKYDTSVTELDN 310


>AE014296-891|AAF47928.1|  487|Drosophila melanogaster CG32238-PA
           protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 536 DAPSLLQTTCADMWIFASRSSFRTLKVY---QPYCGYCTVVFKCNAR*FDS 393
           D P L+     D+ ++   +SFR LK Y   Q +C +CTV +  +    D+
Sbjct: 260 DNPLLIGGKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVKYDTSVTELDN 310


>AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p
           protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 247 SLASVGVCHLAARSHTRRRRLQNGIST-SNDTTSEAHMLNTLTAVK 113
           S+  + +CHLA  +H  R +L++  S+ SN  +S++   N  ++ K
Sbjct: 364 SIVLLAICHLATMNHVLRHQLRSRTSSHSNSCSSKSCSSNKCSSNK 409


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,477,824
Number of Sequences: 53049
Number of extensions: 457062
Number of successful extensions: 1347
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)