Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11p14r
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 71 1e-12
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 70 2e-12
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 68 6e-12
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 60 2e-09
SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3) 60 2e-09
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 54 1e-07
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 49 4e-06
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 41 8e-04
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 35 0.072
SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4) 33 0.17
SB_46283| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19) 31 1.2
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 30 2.0
SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06) 29 2.7
SB_51034| Best HMM Match : Extensin_2 (HMM E-Value=0.038) 29 4.7
SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 28 8.3
SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKV---GWSDPIKA-NEMLSKI 521
Y SKAA+ T+A+A + GIRVNA+ P I TE + DP KA + L++
Sbjct: 157 YGTSKAAVIGFTKAIAADYITKGIRVNAVCPGTIYTESLQYRIDSTPDPQKALADFLARQ 216
Query: 520 PLGRFGEISEVVNAVVFLLSERSSMINGVELPIDGGF 410
P GRFG+ EV N VVFL S+ SS I G + +DGG+
Sbjct: 217 PTGRFGKPEEVANVVVFLASDESSFITGQCITVDGGW 253
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 509
Y+A K A+D++T +A E+ GIRVNA+ P VI TE+ G +P + + +P+GR
Sbjct: 162 YAAVKGAIDSMTLGLAKEVAADGIRVNAVRPGVIETEIHASG-GEPERVARVSQSVPMGR 220
Query: 508 FGEISEVVNAVVFLLSERSSMINGVELPIDGG 413
G EV A+++L SE++S +G L + GG
Sbjct: 221 GGLAREVAEAILWLASEQASYTSGALLDVSGG 252
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 509
Y+A+K AL LT+AMALEL + I VNA+ P I T M + SD +K + S IPL R
Sbjct: 189 YTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSD-VKPDAEPS-IPLRR 246
Query: 508 FGEISEVVNAVVFLLSERSSMINGVELPIDGGFL 407
FG E+ + VV+L SE ++ G L +DGGF+
Sbjct: 247 FGATHEIASLVVWLCSEGANYTTGQSLIVDGGFM 280
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/95 (38%), Positives = 51/95 (53%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 509
YS SK L LT+A+A E GIRVN + P VI T + W + ++ +IP+ R
Sbjct: 39 YSISKTTLLGLTKALADECADIGIRVNCVAPGVIKTRFSAALWKNEAMHQKVKERIPMKR 98
Query: 508 FGEISEVVNAVVFLLSERSSMINGVELPIDGGFLA 404
G E+ AV FL S+++S I G + I GG A
Sbjct: 99 LGTSEEIGGAVSFLCSDQASYITGETIVIGGGMTA 133
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPLG 512
Y+ASKA ++ LT+ A+EL +GIR NAI P I T M + P E + IPLG
Sbjct: 421 YAASKAGVEGLTKVCAIELARFGIRCNAILPGFIDTPMTR---KVPAHITEQIKHFIPLG 477
Query: 511 RFGEISEVVNAVVFLLSERSSMINGVELPIDG 416
RFG+ S + + V FL + SS I G + + G
Sbjct: 478 RFGQPSNIADVVSFLACDESSYITGASIDVTG 509
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Frame = -2
Query: 682 ASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGRFG 503
A++A + LT ++A+E GIR+N + P VI +E A + P ++ +P R G
Sbjct: 188 AARAGVHNLTMSLAVEWISNGIRINNVAPGVIFSETAAANYPIPDLFEKIRQTLPAKRCG 247
Query: 502 EISEVVNAVVFLLSERSSMINGVELPIDG 416
E EV AV FLLS +S I G + +DG
Sbjct: 248 ETEEVSGAVCFLLSPAASYITGSTIKVDG 276
>SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3)
Length = 253
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = -2
Query: 691 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTE----MAK-VGWSDPIKANEMLS 527
I + +K ++ L R A L P GI VNA+ P IM++ M + +G + +
Sbjct: 152 ITAQAKGCMELLVRYYAQVLAPRGITVNAVIPGYIMSDAWHNMTRAMGGVSAEPVQKRIQ 211
Query: 526 KIPLGRFGEISEVVNAVVFLLSERSSMINGVELPIDGG 413
P+ RFGE E V FL S R+S I GV LP+DGG
Sbjct: 212 STPMRRFGEGREFSQVVSFLCSPRASFITGVALPVDGG 249
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = -2
Query: 658 LTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKA--NEMLSKIPLGRFGEISEVV 485
+T+++A E G YG+R NAI P I T+ A DP A + + +IP GRFGEI+E+
Sbjct: 1 MTKSLAAEWGRYGMRFNAIAPGPIETKGA-FSRLDPTGAFRSHAIERIPTGRFGEINEIA 59
Query: 484 NAVVFLLSERSSMING 437
N +L+S+ +S I G
Sbjct: 60 NLAAYLVSDYASWITG 75
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 55.2 bits (127), Expect = 5e-08
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 16/108 (14%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINP---------TVIM------TEMAKVGWSD 554
YS+SK A+ ++T+ MAL+L IRVN+++P T+++ T++A+ D
Sbjct: 201 YSSSKGAIISMTKCMALDLAKDHIRVNSLSPGWTYSPEVATILLVTYCIQTQVARAAGDD 260
Query: 553 PIKANEMLSKIP-LGRFGEISEVVNAVVFLLSERSSMINGVELPIDGG 413
+ + L R GE +E+ A+ FL SE +S I +LP+DGG
Sbjct: 261 RARWEPLWGPYHMLNRLGEPAEIAAAISFLCSEDASFITAADLPVDGG 308
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = -2
Query: 691 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLG 512
+Y SKA L T+A+A + P +RVN ++P IM WS+ +A E+L +PLG
Sbjct: 163 VYCVSKAGLHMCTQALAKDFAP-DVRVNGVSPGFIMVPG---DWSEEKEA-EILKNVPLG 217
Query: 511 RFGEISEVVNAVVFL 467
R GE++++ AV++L
Sbjct: 218 RQGELADITEAVLYL 232
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPL- 515
Y+A+K A++A+T MA +L GIRVN I+P + T M G + ++ E ++K +P
Sbjct: 445 YAATKGAINAMTLPMARDLAKLGIRVNTISPGIFNTPMFMAGRTK--ESREAITKSVPFP 502
Query: 514 ---GRFGEISEVVNAVVFLLSERSSMINGVELPIDG 416
G+ E +++V AV+ + MING + IDG
Sbjct: 503 RRTGKPEEFAQLVQAVI-----ENPMINGEIIRIDG 533
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 41.1 bits (92), Expect = 8e-04
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSK-IPL- 515
YSASK + +T +A +L GIRVN I P + +T + + S P K L+K +P
Sbjct: 174 YSASKGGIVGMTLPIARDLARNGIRVNTIAPGLFLTPLLE---SLPEKVRIALAKTVPFP 230
Query: 514 GRFGEISEVVNAVVFLLSERSSMINGVELPIDG 416
R G E + V ++ + M+NG + IDG
Sbjct: 231 PRLGHPDEYAHLVQSVM--ENPMMNGETIRIDG 261
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = -2
Query: 676 KAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWS---DPIKA-NEMLSKIPLGR 509
K A+ ++TRA+A++ YG+RVN+++ ++T + + S D KA + + LGR
Sbjct: 63 KGAITSMTRALAIDEAAYGVRVNSLSIGNVLTPLWESNASATPDYKKAIQDGMDAQLLGR 122
Query: 508 FGEISEVVNAVVFLLSERSSMINGVELPIDGG 413
G + E A ++L ++ ++ G +L + GG
Sbjct: 123 MGTLHESGQACLYLAAD-ATFTTGTDLLLTGG 153
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 691 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
+Y SK A++A + A+ LEL P+G++V + P TEM
Sbjct: 44 VYCISKFAVEAFSSALRLELEPWGVKVIVVEPGGYRTEM 82
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
YSASK A+ + + A+ +E+ P+G+ V+ I+P T +
Sbjct: 695 YSASKYAVQSFSDALRIEMRPFGVSVHIIDPGFFKTNL 732
>SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4)
Length = 734
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 381 DNIFRYYVARKPPSMGNST-PLIILDLSLRRKTTAFTTSDISPNLPSGILESISLAFIGS 557
+N ++ ++P + G+S+ + I + SL ++++FT + S PS +L I F S
Sbjct: 434 NNSLNLFIKQRPQATGSSSLTVFIEESSLLCRSSSFTIAVHSGCPPSKMLHFI-YPFTAS 492
Query: 558 DQPTLAISVIITVGLIAFTLIPYG---PSSKAI 647
+ LA +V T+G++ +PY PS++ +
Sbjct: 493 EDALLASTVKDTLGVVRNKKLPYNYRPPSARGV 525
>SB_46283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 619 IRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGR 509
IRVN +NPTV+ T+ AK + K PLGR
Sbjct: 1 IRVNTVNPTVVWTDAAKKAFGTREGCKMFEEKCPLGR 37
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 691 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMA 572
IY ASK A++ AMA LG + I+ I P + T A
Sbjct: 186 IYCASKFAVEGYAEAMAPVLGKFNIKTTIIEPGPVATNFA 225
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
Y ASK+AL+ ++++M+++L GI V ++P + T+M
Sbjct: 133 YRASKSALNIISKSMSVDLKGDGISVVMLHPGWVQTDM 170
>SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
Y ASK+AL+ ++++M+++L GI V ++P + T+M
Sbjct: 181 YRASKSALNIVSKSMSVDLKGDGISVVILHPGWVQTDM 218
>SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
Y ASK++L+ ++++M+++L GI V ++P + T+M
Sbjct: 176 YRASKSSLNIISKSMSVDLKGDGISVVMLHPGWVQTDM 213
>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
Length = 494
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 369 VFWYDNIFRYYVARKPPSMGNSTPLIILDLSLRRKTTAFTT 491
++WY NI++ + + M N+T +I++L++ T TT
Sbjct: 94 IYWYVNIYQNSILTRNQRMKNATNYLIVNLAVSELVTVCTT 134
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 534 YSITKYGVEAFSDVLRREMFPWGVRVSIIEPQAFKTPL 571
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 61 YSITKYGVEAFSDVLRREMLPWGVRVSIIEPQAFKTPL 98
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 575
YS +K ++A + + E+ P+G+RV+ I P T +
Sbjct: 227 YSITKYGVEAFSDVLRREMLPWGVRVSIIEPQAFKTPL 264
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINP 596
YS +K ++A + A+ E+ P+G+RV I P
Sbjct: 91 YSITKYGVEAFSDALRREMSPWGVRVIIIEP 121
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2
Query: 688 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSD 554
YSA+K L L+ +A E Y I+ NAI P V + + K SD
Sbjct: 165 YSAAKLGLVGLSNTLAQEGAKYNIKCNAIAP-VAGSRLTKTVMSD 208
>SB_34916| Best HMM Match : adh_short (HMM E-Value=4.8e-06)
Length = 251
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 682 ASKAALDALTRAMALELGPYGIRVNAINPTVIMT 581
ASK AL+ +T++++++L GI A+NP + T
Sbjct: 174 ASKCALNMVTKSLSVDLKKDGILAVAVNPGFVKT 207
>SB_51034| Best HMM Match : Extensin_2 (HMM E-Value=0.038)
Length = 354
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 414 PPSMGNSTPLIILDLSLRRKTTAFTTSDISPNLPSGILESISLAFIGSDQPTLAISVII 590
PPS S ++DL R + T N P+ +ESI L + + P + +I
Sbjct: 178 PPSTATSLRSTVIDLPSPRTSARMTRKRARSNTPASSVESIDLNLLIRNSPDSLLGGLI 236
>SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -2
Query: 661 ALTRAMALELGPYGIRVNAINPTVIM-TE-MAKVG 563
A+ + +A+E GP G+RVN + P I TE M+++G
Sbjct: 2 AMVKHLAVEWGPQGVRVNCVAPGPIEDTEGMSRLG 36
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 191 LTSSFATTSEKIFDIFLVIHIWPKIFYSIFNLWLFSLCSF 310
L S T+ K++ I + +WP +F S W + SF
Sbjct: 1242 LRSLHFTSGSKVYLIISIAWVWPAVFSSCSPTWSYDRGSF 1281
>SB_37759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 474 TTAFTTSDISPNLPSGILESISLAFIGSDQPTLAISVIITVGLIAFTLI 620
TT TT+ ++ L + L+ I+L D TLA + + T L+ TL+
Sbjct: 96 TTLVTTTLVTTTLVTTTLDIITLITTTLDITTLATTTLATTTLVTTTLV 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,270,991
Number of Sequences: 59808
Number of extensions: 344752
Number of successful extensions: 772
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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