Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11p14f
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 85 6e-17
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 83 1e-16
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 62 3e-10
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 59 3e-09
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 58 4e-09
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 57 1e-08
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 57 1e-08
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 54 1e-07
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 52 4e-07
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 51 7e-07
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 50 2e-06
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 48 6e-06
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 45 4e-05
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 44 1e-04
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 43 2e-04
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 38 0.009
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 33 0.19
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 33 0.25
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 29 4.1
SB_37871| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_14963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_53413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 28 7.1
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 84.6 bits (200), Expect = 6e-17
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +3
Query: 165 PSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAV 344
PSI V D+ D EK +K++ES FD LVNNA A+ E FL+ P +FD+ + NV+A
Sbjct: 2 PSIQAVCDDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAP 61
Query: 345 LNISQVVARKMIENKTHGAIVNISSQASKAALKDH-TIYSASKAAL 479
L I+Q VA+KM+ GAIVN+SS ++ L + ++ S AAL
Sbjct: 62 LFIAQAVAKKMVAKGEGGAIVNVSSVFTELHLPNSISLGKYSNAAL 107
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +3
Query: 174 DIVDVDIGDWEK----TRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA 341
+IV +D+G+ + K+++ LG D LVNNA PFLD + + K F V+V
Sbjct: 91 EIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDG 150
Query: 342 VLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPY 521
SQ+ AR+M++ G I+NI+S L D + Y+A+K AL LT+AMALEL +
Sbjct: 151 AFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRH 210
Query: 522 GIRV 533
I V
Sbjct: 211 KILV 214
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 72.5 bits (170), Expect = 3e-13
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Frame = +3
Query: 27 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWE 206
K K ++++ R GA ++A L+ L S P I+ VD+ D+E
Sbjct: 15 KNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEKLKELHS-VPGIETRVVDVTDYE 73
Query: 207 KTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIEN 386
+K + D L N A + + +CS +D T D+NVK++ +++ KM
Sbjct: 74 AIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKM-RQ 132
Query: 387 KTHGAIVNISSQASK-AALKDHTIYSASKAALDALTRAMALELGPYGIRV 533
+ G+I+N++S AS + Y SKAA+ T+A+A + GIRV
Sbjct: 133 QGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIRV 182
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 62.5 bits (145), Expect = 3e-10
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 156 SEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAA-VAVCEPFLDCSPSNFDKTFDVN 332
+++ +DI D + E V +S G D ++NNA V P + + FDK DVN
Sbjct: 53 NQFYVVDITDDSVVK-EWATNVCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVN 111
Query: 333 VKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALEL 512
+K N+ + KMI+ G IVN SS KA Y A+K ++ LTRA+A+EL
Sbjct: 112 LKGSANVIRSFLPKMIK-AGKGVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMEL 170
Query: 513 GP 518
P
Sbjct: 171 PP 172
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Frame = +3
Query: 102 GANIVALSRTRSHLESLQSEYPS------IDIVDVDIGDWEK--TRKVVESLGHFDALVN 257
G ++ +R+ +E + E+ S +VD+ + K +++V+ G L+N
Sbjct: 31 GHTVIGCARSHDKIEKINEEFASGKEKRQFYVVDISNDEAVKQWSQQVMLDFGAPSLLIN 90
Query: 258 NAAVAVCEP-FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKA 434
N+ V F + F+K D+N+K N+ + MIE K G IVN +S +
Sbjct: 91 NSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEAKRKGVIVNFTSGWGRC 150
Query: 435 ALKDHTIYSASKAALDALTRAMALELGPY 521
+ Y +K AL+ L++A+A EL Y
Sbjct: 151 VAPEVAPYCTTKWALEGLSKALAEELPEY 179
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 58.4 bits (135), Expect = 4e-09
Identities = 33/96 (34%), Positives = 54/96 (56%)
Frame = +3
Query: 246 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 425
A+VNNA + PF + + FDVNV +LN+++ + K+ G IVN++S A
Sbjct: 627 AIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLL--KKSCGRIVNVASCA 684
Query: 426 SKAALKDHTIYSASKAALDALTRAMALELGPYGIRV 533
K + YSASK A+ + + A+ +E+ P+G+ V
Sbjct: 685 GKLPGPGLSAYSASKYAVQSFSDALRIEMRPFGVSV 720
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 57.2 bits (132), Expect = 1e-08
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Frame = +3
Query: 21 SFKGKRILVTXXXXXXXXXXXXELWRAGANIV-------ALSRTRSHLESLQSE--YPSI 173
S +G+ +L+T L + G +V AL ++ L +E Y
Sbjct: 32 SLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQDLGAETHYFEC 91
Query: 174 DIVDVDIGDWEKTRKVVES-LGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLN 350
D+ D + EK VE G+ L+NNA V + FL+CS S+ +TF VN A +
Sbjct: 92 DVRKKD--EVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIW 149
Query: 351 ISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYG 524
Q M+E K G IV+I+S A L Y ASK A L A+ E+ G
Sbjct: 150 TIQRFIPSMME-KNRGHIVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREIHGLG 206
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/113 (31%), Positives = 58/113 (51%)
Frame = +3
Query: 204 EKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIE 383
E + E G D LVNNA ++ + S +TF+ N VL +S+ V +M
Sbjct: 73 EALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKS 132
Query: 384 NKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVMLS 542
+ + G I+NISS A + +Y ASK A++ L+ ++A L +G++ LS
Sbjct: 133 DHS-GHIINISSTAGHTGMPFTGLYCASKFAVEGLSESLAPLLRKFGVKFALS 184
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = +3
Query: 216 KVVESLGHFDALVNNAAVAV-CEPFLDCSPSN-FDKTFDVNVKAVLNISQVVARKMIENK 389
++VE G D LVNNA + + C P +C+ ++ +K F+ NV ++ ++ V M + +
Sbjct: 108 EIVEKEGRIDVLVNNAGIGLFCVP--ECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQR 165
Query: 390 THGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
G +VNI S IY ASK A++ AMA LG + I+ +
Sbjct: 166 A-GHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLGKFNIKTTI 214
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 336 KAVLNISQVVARKMIENK-THGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALEL 512
K + Q A+ M+ENK +G+I+NISS +K+ Y+ASKA ++ LT+ A+EL
Sbjct: 380 KGTFLMCQTTAKAMVENKINNGSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIEL 439
Query: 513 GPYGIR 530
+GIR
Sbjct: 440 ARFGIR 445
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 52.0 bits (119), Expect = 4e-07
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Frame = +3
Query: 30 GKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSID----------- 176
G+ +T EL + G +V +R RS LE ++ + +I
Sbjct: 42 GRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQ 101
Query: 177 ---IVDVDIGDWEKTRKVVES-LGHF---DALVNNAAVAVCEPFLDCSPSNFDKTF-DVN 332
++ +D+ +++K ++V S L HF D L+NN+ + ++ +K D+N
Sbjct: 102 DILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLN 161
Query: 333 VKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALEL 512
AV+++++ V MIE K +G IV SS A K T Y+A+K A+ + +EL
Sbjct: 162 FLAVVSLTKAVLPHMIERK-NGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGLRVEL 220
Query: 513 GPYGIRVML 539
P I V L
Sbjct: 221 FPKNIHVTL 229
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 51.2 bits (117), Expect = 7e-07
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Frame = +3
Query: 141 LESLQSEYPSIDIVDVDIGDWEKTRKVVE----SLGHFDALVNNAAVAVCEPFLDCSPSN 308
+ S++S+ + D+ E RK++E + G D LVNNA+
Sbjct: 57 MNSVRSDSAIMLKADLSTNIQETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEET 116
Query: 309 FDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDAL 488
++K VN+ +SQ + ++HG+I+N+ ++ L +H++Y SKA L
Sbjct: 117 WNKLMGVNLSFPFFLSQAAFPHL--KRSHGSIINMIDIHAERPLANHSVYCVSKAGLHMC 174
Query: 489 TRAMALELGP 518
T+A+A + P
Sbjct: 175 TQALAKDFAP 184
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 50.0 bits (114), Expect = 2e-06
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Frame = +3
Query: 90 LWRAGANIVALSRTRSHLESLQSEYPS-IDIVDVDIGDWEKTRKVV----ESLGHFDALV 254
L RAGA V + S ++ E+ S + + + + + E G +A +
Sbjct: 308 LIRAGARAVIVDLPSSEGQNTAQEFGSHCTFIPGHVDSESEIKAAIKVAKEKYGCVNASI 367
Query: 255 NNAAVAVCEPFLDCS----PSN-FDKTFDVNVKAVLNISQVVARKMIENKT-----HGAI 404
N AA+ E L S P F++T +N N++++VA M N G I
Sbjct: 368 NTAALNTKELTLSESGCPHPLELFEETMKINAVGTFNVARLVAESMATNTPDQEGERGVI 427
Query: 405 VNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRV 533
VN+SS Y+A+K A++A+T MA +L GIRV
Sbjct: 428 VNVSSIHGTEGQSGKVAYAATKGAINAMTLPMARDLAKLGIRV 470
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 288 LDCSPSNFDKTFDVNVKAVLNISQVVARKM---IENKTHGAIVNISSQASKAALKDHTIY 458
LD ++ KT VNV+ N+ Q M GA+VN++S ++ A H Y
Sbjct: 142 LDVEEKDWHKTMSVNVQGYANMVQACHPYMKTACNTGPSGAVVNLASISAHRAQPVHWTY 201
Query: 459 SASKAALDALTRAMALELGPYGIRV 533
S+SK A+ ++T+ MAL+L IRV
Sbjct: 202 SSSKGAIISMTKCMALDLAKDHIRV 226
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Frame = +3
Query: 180 VDVDIGDWEKTRKVVESL----GHFDALVNNAAVAVCEPFLD-CSPSNFDKTFDVNVKAV 344
V D+ D + ++ L G D LVNNA + + L+ + + + F NV
Sbjct: 62 VQADVADERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGS 121
Query: 345 LNISQVVARKMIENK--THGAIVNISSQASK-AALKDHTIYSASKAALDALTRAMALELG 515
+ ++M + GAIVN+SS A++ A ++ Y+A K A+D++T +A E+
Sbjct: 122 FLCCREAIKRMSTRQGGNGGAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKEVA 181
Query: 516 PYGIRV 533
GIRV
Sbjct: 182 ADGIRV 187
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 249 LVNNAAVAVCEPFLDCSP-SNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 425
+VNNA +A P +D P F D+N+ ++++++ + + G IVN++S A
Sbjct: 20 VVNNAGIAGVGP-VDWIPVERFKHVADINLWGLVDVTKTFLP--LVKRARGRIVNVTSIA 76
Query: 426 SKAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
+ L + YS SK +A + A+ EL P+GI V +
Sbjct: 77 GRFTLPFASPYSVSKYGAEAFSDAIRRELAPFGISVSI 114
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +3
Query: 225 ESLGHFDALVNNAAVAVCEPFLDCSPSN-----FDKTFDVNVKAVLNISQVVARKMIENK 389
E G +A VN A + + L + F+K VN N+ ++VA +MI+N+
Sbjct: 87 EKFGPLNAAVNCAGIGIAVKTLSKTGEAHALDLFEKVLKVNTTGSFNVIRLVAEQMIKNE 146
Query: 390 T-----HGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRV 533
G I N +S A+ YSASK + +T +A +L GIRV
Sbjct: 147 PTEGGERGVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIARDLARNGIRV 199
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/98 (24%), Positives = 49/98 (50%)
Frame = +3
Query: 246 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 425
A+ NNA P ++ + DVN+ ++++++ + G +VN+SS A
Sbjct: 23 AVYNNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLP--LVKMARGRVVNVSSIA 80
Query: 426 SKAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
+ YS +K ++A + A+ E+ P+G+RV++
Sbjct: 81 GIVVVPSMAAYSITKYGVEAFSDALRREMSPWGVRVII 118
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +3
Query: 249 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQAS 428
LVNNA V + P + + + +VN+ + +++ + K G +VNISS A
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVNISSVAG 98
Query: 429 KAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
L+ + Y SK + + A+ E+ P+G+ V+L
Sbjct: 99 MVPLQRSSAYCISKFGVSVFSDALRREMSPWGVGVVL 135
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/98 (28%), Positives = 49/98 (50%)
Frame = +3
Query: 246 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 425
AL NNA C P S++ + DVN+ V+++S+ + G +VNISS
Sbjct: 258 ALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFL--PLVKMARGRVVNISSIY 315
Query: 426 SKAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
+ + Y+ +K ++A + +M E+ +G+RV L
Sbjct: 316 GFFSPIFGSHYAITKYGVEAFSDSMRREMARWGVRVSL 353
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 45/79 (56%)
Frame = +3
Query: 303 SNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALD 482
S + K DVN+ +++++ + K G +VNISS A + ++ + YS +K ++
Sbjct: 11 SEYKKMADVNLWGLIDVTLTFLPLI--RKCGGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 483 ALTRAMALELGPYGIRVML 539
A + A+ E+ P+G++V L
Sbjct: 69 AFSDALRREVSPWGVKVTL 87
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/113 (23%), Positives = 55/113 (48%)
Frame = +3
Query: 201 WEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMI 380
+E+ ++V+ S A+ NNA P ++ + DVN+ ++++S+ +
Sbjct: 451 FEQVKRVLPSGTGLWAVYNNAGYMTLAPLEWFPLDDYKRMADVNLWGLVDVSKTFLP--L 508
Query: 381 ENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVML 539
G +VN++S A + YS +K ++A + + E+ P+G+RV +
Sbjct: 509 VKMARGRVVNVASTVGLIANELTAPYSITKYGVEAFSDVLRREMFPWGVRVSI 561
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +3
Query: 306 NFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDA 485
++ + DVN+ ++++++ + G +VN+SS A + YS +K ++A
Sbjct: 13 DYKRMADVNLWGLVDVTKTFLP--LVKMARGRVVNVSSIVGLIANELTAPYSITKYGVEA 70
Query: 486 LTRAMALELGPYGIRVML 539
+ + E+ P+G+RV +
Sbjct: 71 FSDVLRREMLPWGVRVSI 88
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/78 (21%), Positives = 41/78 (52%)
Frame = +3
Query: 306 NFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASKAALDA 485
++ + DVN+ ++++++ + G +VN++S A + YS +K ++A
Sbjct: 179 DYKRMADVNLWGLVDVTKTFLP--LVKMARGRVVNVASIVGLIAGELTAPYSITKYGVEA 236
Query: 486 LTRAMALELGPYGIRVML 539
+ + E+ P+G+RV +
Sbjct: 237 FSDVLRREMLPWGVRVSI 254
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 37.5 bits (83), Expect = 0.009
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Frame = +3
Query: 219 VVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA-----VLNISQVV-----A 368
V +G LVNNA + + FLD KT +VN A LN +V
Sbjct: 124 VKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTV 183
Query: 369 RKMIEN---KTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYG 524
+ + + K HG +VNI+S A + Y +SK ++ +EL G
Sbjct: 184 KSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELSSLG 238
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +3
Query: 246 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 425
AL NNA P + ++ D+N+ ++++++ + K G +VN SS A
Sbjct: 113 ALDNNAGYMGLGPLEWFTMDDYKMQADINLWGLIDVTKTFLPLIKVAK--GRVVNFSSIA 170
Query: 426 SKAALKDHTIYSASKAALDALTRAMALELGPY 521
A YS +K +++ + A+ E+ PY
Sbjct: 171 GVATPALRAAYSVTKYGVESFSDALRREMAPY 202
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 213 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 392
+ + S G D LVNN P + S ++ D N+ + A ++ ++
Sbjct: 107 KSTLSSYGRIDYLVNNGGGQFLCPVSNMSYKGWNAVIDTNLNGTF-LCCTEAYRLWMSEH 165
Query: 393 HGAIVNISSQASKA-ALKDHTIYSASKAALDALTRAMALELGPYGIRV 533
G+IVNI K HT A++A + LT ++A+E GIR+
Sbjct: 166 GGSIVNIIVDFFKGYPNMAHT--GAARAGVHNLTMSLAVEWISNGIRI 211
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 32.7 bits (71), Expect = 0.25
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Frame = +3
Query: 33 KRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS-IDIVDVDIGDWEK 209
K +L+T L + G +++A RTR +SL+ + + +D+ D
Sbjct: 42 KFVLITGSSSGMGRETAIALDKLGFHVLATCRTRKGEDSLRLDCSERMRTYVMDVSDTVS 101
Query: 210 TRKVVESLGHFD--------ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVV 365
R V + + LVNNA + P S + +T DVN+ ++++++
Sbjct: 102 VRSVYQQILQLLESEQQGLWGLVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTKTF 161
Query: 366 ARKMIENKTHGAIVNI-SSQASKAALKDHTIYSASKAAL 479
+ K G +VN+ SS ++ L+ T S +A+
Sbjct: 162 LPLL--KKAKGRVVNMGSSCGAEEMLRFDTFASPETSAV 198
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +3
Query: 453 IYSASKAALDALTRAMALELGPYGIRVML 539
+Y SK A++A + A+ LEL P+G++V++
Sbjct: 44 VYCISKFAVEAFSSALRLELEPWGVKVIV 72
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 392 SWC-HCQHLISGI--KGCSERPHHLQCFKSC 475
++C HC L+ GI +GC R H+ C KSC
Sbjct: 361 TYCDHCGGLLRGIIKQGCRCRDCHINCHKSC 391
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 309 FDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIYSASK 470
FDKTFD+ VKAV + +I +TH +I + Q+ + HT+ + SK
Sbjct: 1000 FDKTFDMQVKAV-SSEGTFEVDLISMETHKSIRDQLIQS--VTIPKHTLQTGSK 1050
>SB_37871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 192 IGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVV 365
I D K + S+GH+ +N + E + D ++FD T + + NI V
Sbjct: 26 ISDKRKGHASMGSIGHYSGDESNVSTGTFEDYSDSESTHFDHTTNEESSSDENIDDTV 83
>SB_14963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 273 QQQLRCSPTHQSDLKIQQPSSSSPNLLYQRLQ 178
Q+Q R PTHQ D+++Q+ +L Q Q
Sbjct: 102 QKQKRQEPTHQQDVEVQEAQQKVDDLTRQNRQ 133
>SB_53413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Frame = +2
Query: 416 ISGIKGCSERPHHLQCF-KSCF-----GCSDSSY--GFRTRTIWNQSNAINPTVIMTEMA 571
+SG GCS + HL C+ ++C C++S Y + TR + + ++ T ++E A
Sbjct: 148 MSGDGGCSLQTRHLSCYCEACLAGDYENCTNSDYVDAWETRDLEHDNSGERTTTTLSETA 207
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = -1
Query: 377 HFPCNYLTYI*DCFNIYIKRFVKVARRTVQKWFTYSNSCVVHQRIKVT*RFNNLPRLLPI 198
++P YL Y N+ KRF +A T K N + ++ + F N P I
Sbjct: 1562 YWPGKYL-YANGEVNVQDKRFEIIANHTCTKTSICLNGSLGEEQHNIFFNFTNKPTNFSI 1620
Query: 197 SYINVYNVYRGVFTLKTF 144
YN+ L TF
Sbjct: 1621 QTTGKYNIAEKEAVLNTF 1638
>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 583 PTNFSHLSHYHSRIDSITLIPYGPSS 506
P+N+ H H H I +I ++P PS+
Sbjct: 473 PSNYYHHHHQHITIITINILPSSPST 498
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 468 KAALDALTRAMALELGPYGIRV 533
K A+ ++TRA+A++ YG+RV
Sbjct: 63 KGAITSMTRALAIDEAAYGVRV 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,872,424
Number of Sequences: 59808
Number of extensions: 312965
Number of successful extensions: 917
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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