Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p13r
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069071-1|AAL39216.1|  496|Drosophila melanogaster GH09052p pro...    32   0.72 
AE014297-372|AAF51943.2|  496|Drosophila melanogaster CG1208-PA ...    32   0.72 
BT001810-1|AAN71565.1|  158|Drosophila melanogaster RH33996p pro...    29   8.8  
AE014296-1113|AAN12094.1|  110|Drosophila melanogaster CG32399-P...    29   8.8  

>AY069071-1|AAL39216.1|  496|Drosophila melanogaster GH09052p
           protein.
          Length = 496

 Score = 32.3 bits (70), Expect = 0.72
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 580 FSTYIKTNNKSCSVIMIIYSIIMFVEKKIYFKNTIFVNSTFDDPSKANIQIGVI 741
           FS     N    SV+++++     +   I+F N IF +S+  +P+   I +GV+
Sbjct: 286 FSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVV 339


>AE014297-372|AAF51943.2|  496|Drosophila melanogaster CG1208-PA
           protein.
          Length = 496

 Score = 32.3 bits (70), Expect = 0.72
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 580 FSTYIKTNNKSCSVIMIIYSIIMFVEKKIYFKNTIFVNSTFDDPSKANIQIGVI 741
           FS     N    SV+++++     +   I+F N IF +S+  +P+   I +GV+
Sbjct: 286 FSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVV 339


>BT001810-1|AAN71565.1|  158|Drosophila melanogaster RH33996p
           protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 94  HTQLKLCTLLL--DPQWNCQNHSIQCQCQ 174
           +T+L+ C      D QWN  +  +QCQCQ
Sbjct: 101 NTRLRTCHTKRWRDNQWNLWSQQVQCQCQ 129


>AE014296-1113|AAN12094.1|  110|Drosophila melanogaster CG32399-PA
           protein.
          Length = 110

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 94  HTQLKLCTLLL--DPQWNCQNHSIQCQCQ 174
           +T+L+ C      D QWN  +  +QCQCQ
Sbjct: 53  NTRLRTCHTKRWRDNQWNLWSQQVQCQCQ 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,545,655
Number of Sequences: 53049
Number of extensions: 447442
Number of successful extensions: 812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)