Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p12f
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    52   2e-09
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    51   6e-09
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.11 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    27   0.11 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.14 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   0.76 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.00 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 28/85 (32%), Positives = 45/85 (52%)
 Frame = +1

Query: 289 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 468
           L ++  FS+F  K R  A  L  +F   ++ +     A YAR  +N  +F YA  +AI+ 
Sbjct: 74  LERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILH 133

Query: 469 RSDTASFVLPAPYEAYPQYFVNMEV 543
           R DT    LP+  E++P  +V+ +V
Sbjct: 134 RQDTQDIDLPSFIESFPDKYVDSKV 158


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 51.2 bits (117), Expect = 6e-09
 Identities = 25/85 (29%), Positives = 46/85 (54%)
 Frame = +1

Query: 289 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 468
           L ++  FS+F  K R+ A  L ++F  A+  +     A + R  +N  +F YA+ +A++ 
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 469 RSDTASFVLPAPYEAYPQYFVNMEV 543
           R DT +  LP+    +P  +V+ +V
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQV 158


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +2

Query: 332 GKKPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 442
           G KP +C+ C    +   +LN   K H+       R+CSY
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 294


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +2

Query: 332 GKKPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 442
           G KP +C+ C    +   +LN   K H+       R+CSY
Sbjct: 13  GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +1

Query: 319  YEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAII 465
            Y+K + + + + +  YYA  F     T+ +  ++   G FL  Y+I +I
Sbjct: 1203 YKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 406 SMLFCRNIQNLWHNRTA*TARWLLPS 329
           S  FC N+Q  + N+ + T  W LP+
Sbjct: 205 SYQFCDNLQYSFDNQCSGTIDWALPN 230


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 406 SMLFCRNIQNLWHNRTA*TARWLLP 332
           S  FC N+Q  + N+ + T  W LP
Sbjct: 196 SYQFCDNLQYSFDNQCSGTIDWALP 220


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLLRKNE 332
           H  E   +F++  +  +PS    ILDLL   E
Sbjct: 605 HCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 636


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLL 320
           H  E   +F++  +  +PS    I+DLL
Sbjct: 865 HAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLL 320
           H  E   +F++  +  +PS    I+DLL
Sbjct: 865 HAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLLRKNE 332
           H  E   +F++  +  +PS    ILDLL   E
Sbjct: 838 HCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLLRKNE 332
           H  E   +F++  +  +PS    ILDLL   E
Sbjct: 838 HCPEGFNEFYNQRRRWMPSTMANILDLLMDYE 869


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLL 320
           H  E   +F++  +  +PS    I+DLL
Sbjct: 865 HAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 237 HKHESLRKFHDDVQGRIPSQEFGILDLL 320
           H  E   +F++  +  +PS    I+DLL
Sbjct: 865 HAPEGFNEFYNQRRRWVPSTIANIMDLL 892


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 432 NVLIRLLHSYY 464
           NVL +L+H YY
Sbjct: 107 NVLFQLIHVYY 117


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 432 NVLIRLLHSYY 464
           NVL +L+H YY
Sbjct: 107 NVLFQLIHVYY 117


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 432 NVLIRLLHSYY 464
           NVL +L+H YY
Sbjct: 427 NVLFQLIHVYY 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,002
Number of Sequences: 336
Number of extensions: 2475
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)