Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p09f
         (567 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34278-1|CAA84032.1|  279|Homo sapiens mucin protein.                  30   4.9  
BC057849-1|AAH57849.1|  241|Homo sapiens DNAJC4 protein protein.       30   4.9  
BC044584-1|AAH44584.1|  241|Homo sapiens DNAJC4 protein protein.       30   4.9  
BC032137-1|AAH32137.1|  311|Homo sapiens DNAJC4 protein protein.       30   4.9  
AF036874-1|AAF97845.1|  241|Homo sapiens multiple endocrine neop...    30   4.9  

>Z34278-1|CAA84032.1|  279|Homo sapiens mucin protein.
          Length = 279

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -1

Query: 420 TRSLRSRWKSSPSITASAHRATSETTWASTHRRPAPRWSTATSHAKSTPS 271
           T +  +R  S+P  + ++   TS T+   T  RP P  ST +S   ST S
Sbjct: 25  TSAPTTRTTSAPKSSTTSAATTSTTSGPETTPRPVPTTSTTSSPTTSTTS 74


>BC057849-1|AAH57849.1|  241|Homo sapiens DNAJC4 protein protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/91 (25%), Positives = 35/91 (38%)
 Frame = -1

Query: 327 RRPAPRWSTATSHAKSTPSTYIEXXXXXXXXXXXXXXXXXXXXXWAFHH*RALGNKSK*K 148
           R P  R   A +  +S PSTY E                        H  R  GN S   
Sbjct: 15  RNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHS 74

Query: 147 LYITMSIAYQDLISRKMSTTTKKDNRKIYNP 55
            ++ +S AY+ ++SR+ S  +  D  +  +P
Sbjct: 75  RFVELSEAYR-VLSREQSRRSYDDQLRSGSP 104


>BC044584-1|AAH44584.1|  241|Homo sapiens DNAJC4 protein protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/91 (25%), Positives = 35/91 (38%)
 Frame = -1

Query: 327 RRPAPRWSTATSHAKSTPSTYIEXXXXXXXXXXXXXXXXXXXXXWAFHH*RALGNKSK*K 148
           R P  R   A +  +S PSTY E                        H  R  GN S   
Sbjct: 15  RNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHS 74

Query: 147 LYITMSIAYQDLISRKMSTTTKKDNRKIYNP 55
            ++ +S AY+ ++SR+ S  +  D  +  +P
Sbjct: 75  RFVELSEAYR-VLSREQSRRSYDDQLRSGSP 104


>BC032137-1|AAH32137.1|  311|Homo sapiens DNAJC4 protein protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/91 (25%), Positives = 35/91 (38%)
 Frame = -1

Query: 327 RRPAPRWSTATSHAKSTPSTYIEXXXXXXXXXXXXXXXXXXXXXWAFHH*RALGNKSK*K 148
           R P  R   A +  +S PSTY E                        H  R  GN S   
Sbjct: 15  RNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHS 74

Query: 147 LYITMSIAYQDLISRKMSTTTKKDNRKIYNP 55
            ++ +S AY+ ++SR+ S  +  D  +  +P
Sbjct: 75  RFVELSEAYR-VLSREQSRRSYDDQLRSGSP 104


>AF036874-1|AAF97845.1|  241|Homo sapiens multiple endocrine
           neoplasia type 1 candidate protein number 18 protein.
          Length = 241

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 23/91 (25%), Positives = 35/91 (38%)
 Frame = -1

Query: 327 RRPAPRWSTATSHAKSTPSTYIEXXXXXXXXXXXXXXXXXXXXXWAFHH*RALGNKSK*K 148
           R P  R   A +  +S PSTY E                        H  R  GN S   
Sbjct: 15  RNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNPSLHS 74

Query: 147 LYITMSIAYQDLISRKMSTTTKKDNRKIYNP 55
            ++ +S AY+ ++SR+ S  +  D  +  +P
Sbjct: 75  RFVELSEAYR-VLSREQSRRSYDDQLRSGSP 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,953,163
Number of Sequences: 237096
Number of extensions: 1289224
Number of successful extensions: 2680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)