Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p09f
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071099-1|AAL48721.1|  153|Drosophila melanogaster RE16005p pro...    30   2.5  
AE014296-1868|AAF50120.2|  153|Drosophila melanogaster CG14147-P...    30   2.5  
BT010316-1|AAQ23634.1|  998|Drosophila melanogaster AT28101p pro...    29   3.3  
AE014134-180|AAF51436.2| 1977|Drosophila melanogaster CG15824-PA...    29   3.3  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    29   4.4  
AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p pro...    29   5.8  
AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-P...    29   5.8  
AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,...    29   5.8  
Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein...    28   7.7  
U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc fi...    28   7.7  
BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p pro...    28   7.7  
AY113616-1|AAM29621.1|  112|Drosophila melanogaster RH63170p pro...    28   7.7  
AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p pro...    28   7.7  
AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA ...    28   7.7  

>AY071099-1|AAL48721.1|  153|Drosophila melanogaster RE16005p
           protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 565 DQHLYHHAVRSL--LGLYHLCLSYHQAPLYC*SHHVEVVHH 449
           D HL HH V SL     +H  L YH A L    H   VVHH
Sbjct: 69  DHHLDHHLVESLPTTVYHHEPLHYHYARL----HSAPVVHH 105


>AE014296-1868|AAF50120.2|  153|Drosophila melanogaster CG14147-PA
           protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 565 DQHLYHHAVRSL--LGLYHLCLSYHQAPLYC*SHHVEVVHH 449
           D HL HH V SL     +H  L YH A L    H   VVHH
Sbjct: 69  DHHLDHHLVESLPTTVYHHEPLHYHYARL----HSAPVVHH 105


>BT010316-1|AAQ23634.1|  998|Drosophila melanogaster AT28101p
           protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 310 VVHRDLSCQIHPVHVHRNH 254
           V H DL C++H  H+ RNH
Sbjct: 474 VDHMDLECKLHLPHIRRNH 492


>AE014134-180|AAF51436.2| 1977|Drosophila melanogaster CG15824-PA
            protein.
          Length = 1977

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 310  VVHRDLSCQIHPVHVHRNH 254
            V H DL C++H  H+ RNH
Sbjct: 1453 VDHMDLECKLHLPHIRRNH 1471


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 360  ATSETTWASTHRRPAPRWSTATSHAKSTPSTYI 262
            +TSE TW++  +RP   WS +T + K T  T +
Sbjct: 3769 STSELTWSALVQRPG-EWSDSTVNKKQTSHTAV 3800


>AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p
           protein.
          Length = 1103

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 396 KSSPSITASAHRATSETTWASTHRRPAPRWSTATSHAKSTPS 271
           ++SPS++ASA R+ S T         A R S+++    +TPS
Sbjct: 53  RASPSVSASARRSPSATPKVPPKMLLAKRPSSSSGKVNATPS 94


>AE014298-2406|AAF48611.3| 1901|Drosophila melanogaster CG32575-PA,
            isoform A protein.
          Length = 1901

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = -1

Query: 405  SRWKSSPSITASAHRATSETTWAST--HRRPAPRWSTATSHAKSTPST 268
            S  +SS + T+++H + S +T AS   H++P P+W+ A     S+ S+
Sbjct: 1834 SESESSTTTTSNSH-SHSHSTGASPEPHQKPYPQWAKALDSVSSSSSS 1880


>AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,
            isoform A protein.
          Length = 2162

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 396  KSSPSITASAHRATSETTWASTHRRPAPRWSTATSHAKSTPS 271
            ++SPS++ASA R+ S T         A R S+++    +TPS
Sbjct: 1112 RASPSVSASARRSPSATPKVPPKMLLAKRPSSSSGKVNATPS 1153


>Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein
            protein.
          Length = 2176

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -1

Query: 396  KSSPSITASAHRATSETTWASTHRRPAPRWSTATSHAKSTPS 271
            ++SPS++ASA R+ S T         A R S+++    +TPS
Sbjct: 1118 RASPSVSASARRSPSATPKVPPKMFLAKRPSSSSGKVNATPS 1159


>U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc
           finger pair-rule proteinprotein.
          Length = 609

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 280 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 170
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 280 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 170
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>AY113616-1|AAM29621.1|  112|Drosophila melanogaster RH63170p
           protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = -1

Query: 465 WRWCTTRLNGRYWMWTRSLRSRWKSSPSI-TASAHRATSETTWASTHR 325
           W W TT      W W+  +R+RWK    I T     A   T W    R
Sbjct: 32  WLW-TTGWTRPGWTWSARIRTRWKWPTRIRTGWTRPARIRTGWTRPAR 78


>AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 280 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 170
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


>AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 280 HPVHVHRNHLFPSFLVVHRVLHHGNHDLVGLPSLAGS 170
           HP + H N  FP+  V H V+HH +H  +     AG+
Sbjct: 154 HPYNHHGN--FPTAAVHHPVVHHPSHHAMSAMHPAGA 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,401,226
Number of Sequences: 53049
Number of extensions: 394422
Number of successful extensions: 1175
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)