Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p08f
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X60155-1|CAB51740.1|  779|Homo sapiens zinc finger 41 protein.         30   5.2  
BC015023-1|AAH15023.1|  779|Homo sapiens zinc finger protein 41 ...    30   5.2  
AL590283-1|CAI41627.1|  779|Homo sapiens zinc finger protein 41 ...    30   5.2  
AL590223-1|CAI41591.1|  779|Homo sapiens zinc finger protein 41 ...    30   5.2  
AB209520-1|BAD92757.1|  698|Homo sapiens zinc finger protein 41 ...    30   5.2  

>X60155-1|CAB51740.1|  779|Homo sapiens zinc finger 41 protein.
          Length = 779

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 582 NQMNFIVFVHDILKTQQIVKKNVQKNMAVSIKLITSNKRMW---WMLRHTI 439
           NQ N +  V  ++K +    KN++K + V+ KL+ S KR+     +L+HT+
Sbjct: 150 NQNNLLSHVKVLIKERGYEHKNIEKIIHVTTKLVPSIKRLHNCDTILKHTL 200


>BC015023-1|AAH15023.1|  779|Homo sapiens zinc finger protein 41
           protein.
          Length = 779

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 582 NQMNFIVFVHDILKTQQIVKKNVQKNMAVSIKLITSNKRMW---WMLRHTI 439
           NQ N +  V  ++K +    KN++K + V+ KL+ S KR+     +L+HT+
Sbjct: 150 NQNNLLSHVKVLIKERGYEHKNIEKIIHVTTKLVPSIKRLHNCDTILKHTL 200


>AL590283-1|CAI41627.1|  779|Homo sapiens zinc finger protein 41
           protein.
          Length = 779

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 582 NQMNFIVFVHDILKTQQIVKKNVQKNMAVSIKLITSNKRMW---WMLRHTI 439
           NQ N +  V  ++K +    KN++K + V+ KL+ S KR+     +L+HT+
Sbjct: 150 NQNNLLSHVKVLIKERGYEHKNIEKIIHVTTKLVPSIKRLHNCDTILKHTL 200


>AL590223-1|CAI41591.1|  779|Homo sapiens zinc finger protein 41
           protein.
          Length = 779

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 582 NQMNFIVFVHDILKTQQIVKKNVQKNMAVSIKLITSNKRMW---WMLRHTI 439
           NQ N +  V  ++K +    KN++K + V+ KL+ S KR+     +L+HT+
Sbjct: 150 NQNNLLSHVKVLIKERGYEHKNIEKIIHVTTKLVPSIKRLHNCDTILKHTL 200


>AB209520-1|BAD92757.1|  698|Homo sapiens zinc finger protein 41
           variant protein.
          Length = 698

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 582 NQMNFIVFVHDILKTQQIVKKNVQKNMAVSIKLITSNKRMW---WMLRHTI 439
           NQ N +  V  ++K +    KN++K + V+ KL+ S KR+     +L+HT+
Sbjct: 69  NQNNLLSHVKVLIKERGYEHKNIEKIIHVTTKLVPSIKRLHNCDTILKHTL 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,632,040
Number of Sequences: 237096
Number of extensions: 1423758
Number of successful extensions: 3394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3393
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)