Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p07r
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro...    28   4.7  
AY089397-1|AAL90135.1|  215|Drosophila melanogaster AT22194p pro...    28   4.7  
AE014297-2647|AAF55655.1|  215|Drosophila melanogaster CG5217-PA...    28   4.7  
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA...    28   4.7  
AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p pro...    28   6.2  

>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p
           protein.
          Length = 2727

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 309 WCRQAX*TRQLEVHYLVGEQQSVLQD 232
           W  Q+  T QL++H   G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835


>AY089397-1|AAL90135.1|  215|Drosophila melanogaster AT22194p
           protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 261 VGEQQSVLQDPQH*VQPVLEDEYDDLQ 181
           V E Q V QDP    QP ++DE+D+++
Sbjct: 144 VHELQPVSQDPDTDPQPTVKDEHDEME 170


>AE014297-2647|AAF55655.1|  215|Drosophila melanogaster CG5217-PA
           protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 261 VGEQQSVLQDPQH*VQPVLEDEYDDLQ 181
           V E Q V QDP    QP ++DE+D+++
Sbjct: 144 VHELQPVSQDPDTDPQPTVKDEHDEME 170


>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
           protein.
          Length = 2727

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 309 WCRQAX*TRQLEVHYLVGEQQSVLQD 232
           W  Q+  T QL++H   G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835


>AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p
           protein.
          Length = 421

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 105 RQVRKRRPVLHXQSPIQRCLGARYDRERLGRPQ 7
           R+  +RRPV   QSP  RC G R   +R  R Q
Sbjct: 178 RRPTERRPVRRSQSPRDRCHGGRDLDQRRQRNQ 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,454,374
Number of Sequences: 53049
Number of extensions: 233817
Number of successful extensions: 392
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)