Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p03r
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.88 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   3.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.6  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 427 VREIKYLCYQSYGPQYF 477
           ++++ +LCY +YG Q F
Sbjct: 143 LKQVMFLCYSTYGIQVF 159


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/25 (28%), Positives = 18/25 (72%)
 Frame = -1

Query: 197 NNIRYYFVFSERIDSMIFDFKINVY 123
           N+I+Y+ + +  ++++IF + I+ Y
Sbjct: 380 NSIQYFCLMARCLNTLIFYYHISTY 404


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 477 KILRPIALVAEIF 439
           KI RPI ++AEIF
Sbjct: 5   KIFRPIKILAEIF 17


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 477 KILRPIALVAEIF 439
           KI RPI ++AEIF
Sbjct: 5   KIFRPIKILAEIF 17


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 630 CHYNETQLRNASLMLNKTVPGRRPFIK 550
           C  +  +  + SL   K  PG R FIK
Sbjct: 90  CQESGEREASVSLFCPKAKPGERKFIK 116


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GVVSPEQPYRHNKRG 366
           GVVS E P++H   G
Sbjct: 17  GVVSAEHPHQHQHYG 31


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 613 SFIIMTV*IFFLLISFY 663
           +FII TV + FLL  +Y
Sbjct: 119 AFIIFTVHLLFLLCIYY 135


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 87  SRFRYSN*SFIVTQTENLSS 28
           S FRY N + ++ Q EN+++
Sbjct: 592 SWFRYGNGALMINQWENVTN 611


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 87  SRFRYSN*SFIVTQTENLSS 28
           S FRY N + ++ Q EN+++
Sbjct: 592 SWFRYGNGALMINQWENVTN 611


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 322 GVVSPEQPYRHNKRG 366
           GVVS E P++H   G
Sbjct: 17  GVVSAEHPHQHQHYG 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,353
Number of Sequences: 336
Number of extensions: 3564
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)