Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p01f
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    24   4.5  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   6.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   6.0  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   7.9  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   7.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.9  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 178 YAQHRGPLHHEEAFRYYAGVYVPHGVSGGRDQHC 279
           YA H  P H  E  +Y    + P  V+  RD +C
Sbjct: 404 YAMHHDPAHFPEPEQYRPERFSPDEVA-RRDPYC 436


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 616 REATVRVDDASC-ISLEIMNEMNAAAIVNDRDLFDGLPDVQFLT 488
           RE    + +  C ++L+   EM AAA  +  +    LPD Q +T
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYELPDGQVIT 250


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 423  SLDQRRGIVRKFGSINCESLVEMGMVQKPW 334
            S+D  +GI+R  G+++ E   E  +  + W
Sbjct: 1109 SIDPEKGILRVAGALDREETAEYMLAVEAW 1138


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -2

Query: 610 ATVRVDDASCISLEIMNEMNAAAIVNDRDLFDGLPDVQFLTQR 482
           +T  +  +    L  + E N ++  + +DL   L ++QF+T R
Sbjct: 398 STTAIGGSVFTRLTTVEEQNVSSGCSHKDLHHILKELQFITNR 440


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -2

Query: 610 ATVRVDDASCISLEIMNEMNAAAIVNDRDLFDGLPDVQFLTQR 482
           +T  +  +    L  + E N ++  + +DL   L ++QF+T R
Sbjct: 398 STTAIGGSVFTRLTTVEEQNVSSGCSHKDLHHILKELQFITNR 440


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
 Frame = +3

Query: 453 TRPPLTS*SRRCVRNWTSGRPSKRS------LSLTMAAA 551
           +RP LT+  RR  R  TS  PS+RS      LSLT++++
Sbjct: 15  SRPILTTRGRRWPRPPTSCWPSRRSRLCIIALSLTLSSS 53


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 530 QRSFRRSPRCPVPHAAP*SAGQWRPRLKCSQSAHQARWTNEEALCGS 390
           QR +R   R  + HA   S  + +  ++C    H+AR  +    C +
Sbjct: 475 QRCYRCLERGHLAHACRSSTDRQQLCIRCGSEGHKARDCSSYVKCAA 521


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,514
Number of Sequences: 2352
Number of extensions: 14598
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)