Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p01f
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70872-1|CAA50220.1|  469|Homo sapiens properdin protein.              30   5.8  
X57748-1|CAA40914.1|  469|Homo sapiens properdin protein.              30   5.8  
M83652-1|AAA36489.1|  469|Homo sapiens complement omponent prope...    30   5.8  
BC015756-1|AAH15756.1|  469|Homo sapiens complement factor prope...    30   5.8  
AY297813-1|AAP43692.1|  469|Homo sapiens properdin P factor, com...    30   5.8  
AK123170-1|BAC85547.1|  330|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AF005668-1|AAB62886.1|  469|Homo sapiens properdin protein.            30   5.8  
AF005666-1|AAC51626.1|  469|Homo sapiens properdin protein.            30   5.8  
AF005665-1|AAB63280.1|  469|Homo sapiens properdin protein.            30   5.8  

>X70872-1|CAA50220.1|  469|Homo sapiens properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>X57748-1|CAA40914.1|  469|Homo sapiens properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>M83652-1|AAA36489.1|  469|Homo sapiens complement omponent
           properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>BC015756-1|AAH15756.1|  469|Homo sapiens complement factor
           properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>AY297813-1|AAP43692.1|  469|Homo sapiens properdin P factor,
           complement protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>AK123170-1|BAC85547.1|  330|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41175 fis, clone BRACE2042550, highly  similar
           to Bos taurus mRNA for SCO-spondin. ).
          Length = 330

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 503 CPVPHAAP*SA-----GQWRP-RLKCSQSAHQARWTNEEALCG 393
           CP P A P S      G W P ++ CS    + RW   EALCG
Sbjct: 269 CPDPGACPDSCQWSLWGPWSPCQVPCS-GGFRLRWREAEALCG 310


>AF005668-1|AAB62886.1|  469|Homo sapiens properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>AF005666-1|AAC51626.1|  469|Homo sapiens properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


>AF005665-1|AAB63280.1|  469|Homo sapiens properdin protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -1

Query: 569 NHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SA--GQWRPRLKCSQSAH 429
           NH   +CGGHC  Q   + S  C      P       W P   CS S H
Sbjct: 164 NHPAPKCGGHCPGQA--QESEACDTQQVCPTHGAWATWGPWTPCSASCH 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,280,983
Number of Sequences: 237096
Number of extensions: 2004926
Number of successful extensions: 3574
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3574
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)