Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11p01f
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016099-1|AAV36984.1| 319|Drosophila melanogaster LD27268p pro... 55 9e-08
AY069416-1|AAL39561.1| 269|Drosophila melanogaster LD11211p pro... 55 9e-08
AE014134-159|ABC65865.1| 269|Drosophila melanogaster CG3662-PB,... 55 9e-08
AE014134-158|AAF51452.1| 319|Drosophila melanogaster CG3662-PA,... 55 9e-08
AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-P... 30 2.2
AY069677-1|AAL39822.1| 442|Drosophila melanogaster LD45245p pro... 30 2.9
AE014297-1536|AAF54827.1| 442|Drosophila melanogaster CG5961-PA... 30 2.9
DQ831954-1|ABJ09069.1| 1223|Drosophila melanogaster SnoN protein. 29 3.9
DQ831953-1|ABJ09068.1| 1223|Drosophila melanogaster SnoN protein. 29 3.9
DQ831952-1|ABJ09067.1| 1223|Drosophila melanogaster SnoN protein. 29 3.9
DQ831951-1|ABJ09066.1| 958|Drosophila melanogaster SnoN2 protein. 29 3.9
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 29 5.1
AE014296-2186|AAF49883.1| 697|Drosophila melanogaster CG10969-P... 29 5.1
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA... 29 5.1
AM282581-1|CAK54357.1| 1011|Drosophila melanogaster dSki protein... 28 9.0
>BT016099-1|AAV36984.1| 319|Drosophila melanogaster LD27268p
protein.
Length = 319
Score = 54.8 bits (126), Expect = 9e-08
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +2
Query: 239 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTIPISTRDSQLMEPNFRTM---PL 409
+FL+A+VV + GG LYR Y + RY C IP ++ RT+ L
Sbjct: 66 LFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSMEMARVYPRTVEPFAL 125
Query: 410 RW-SNEPD----VQIVSTLDEAATDQLITALREELDIGETVEKISVIDNGRRIHFIHDFQ 574
W S P+ + +LDE+ + I + D G + +GRR F+HDF+
Sbjct: 126 NWRSLLPELAQPMPNSGSLDESHFREDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFK 185
Query: 575 TNTTGIID--SDRCFTMEL 625
N + IID + RCF M L
Sbjct: 186 ENQSAIIDTTTGRCFIMPL 204
>AY069416-1|AAL39561.1| 269|Drosophila melanogaster LD11211p
protein.
Length = 269
Score = 54.8 bits (126), Expect = 9e-08
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +2
Query: 239 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTIPISTRDSQLMEPNFRTM---PL 409
+FL+A+VV + GG LYR Y + RY C IP ++ RT+ L
Sbjct: 16 LFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSMEMTRVYPRTVEPFAL 75
Query: 410 RW-SNEPD----VQIVSTLDEAATDQLITALREELDIGETVEKISVIDNGRRIHFIHDFQ 574
W S P+ + +LDE+ + I + D G + +GRR F+HDF+
Sbjct: 76 NWRSLLPELAQPMPNSGSLDESHFREDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFK 135
Query: 575 TNTTGIID--SDRCFTMEL 625
N + IID + RCF M L
Sbjct: 136 ENQSAIIDTTTGRCFIMPL 154
>AE014134-159|ABC65865.1| 269|Drosophila melanogaster CG3662-PB,
isoform B protein.
Length = 269
Score = 54.8 bits (126), Expect = 9e-08
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +2
Query: 239 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTIPISTRDSQLMEPNFRTM---PL 409
+FL+A+VV + GG LYR Y + RY C IP ++ RT+ L
Sbjct: 16 LFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSMEMARVYPRTVEPFAL 75
Query: 410 RW-SNEPD----VQIVSTLDEAATDQLITALREELDIGETVEKISVIDNGRRIHFIHDFQ 574
W S P+ + +LDE+ + I + D G + +GRR F+HDF+
Sbjct: 76 NWRSLLPELAQPMPNSGSLDESHFREDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFK 135
Query: 575 TNTTGIID--SDRCFTMEL 625
N + IID + RCF M L
Sbjct: 136 ENQSAIIDTTTGRCFIMPL 154
>AE014134-158|AAF51452.1| 319|Drosophila melanogaster CG3662-PA,
isoform A protein.
Length = 319
Score = 54.8 bits (126), Expect = 9e-08
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +2
Query: 239 MFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTIPISTRDSQLMEPNFRTM---PL 409
+FL+A+VV + GG LYR Y + RY C IP ++ RT+ L
Sbjct: 66 LFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSMEMARVYPRTVEPFAL 125
Query: 410 RW-SNEPD----VQIVSTLDEAATDQLITALREELDIGETVEKISVIDNGRRIHFIHDFQ 574
W S P+ + +LDE+ + I + D G + +GRR F+HDF+
Sbjct: 126 NWRSLLPELAQPMPNSGSLDESHFREDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFK 185
Query: 575 TNTTGIID--SDRCFTMEL 625
N + IID + RCF M L
Sbjct: 186 ENQSAIIDTTTGRCFIMPL 204
>AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-PA
protein.
Length = 733
Score = 30.3 bits (65), Expect = 2.2
Identities = 31/115 (26%), Positives = 49/115 (42%)
Frame = +2
Query: 149 DQLCEDELIDMHNIEGPYIMRKRSATMLVCMFLMALVVAATSIAGGVLLYRQYVRIGTVR 328
D D++ DM E Y+ R + LVVAA + G ++L Q VR+
Sbjct: 217 DLFAADDMFDMKP-EVLYMKDLRLSERFYQRLTFRLVVAAILVTGALMLCAQQVRVAKRA 275
Query: 329 RYQGFCTIPISTRDSQLMEPNFRTMPLRWSNEPDVQIVSTLDEAATDQLITALRE 493
P+ + Q ++ T+ L+W +P VS D A + I+A+RE
Sbjct: 276 DEPDLGLAPVESELWQALD----TL-LKW--QPFQSFVSCFDVANNWRKISAMRE 323
>AY069677-1|AAL39822.1| 442|Drosophila melanogaster LD45245p
protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 487 QRRDQLVSGGLV*SAHNLHIRLVGPTKRHCAE-VWFH*LRVPSRN 356
QRR ++ S + +R+ G TKR CA+ VW H V RN
Sbjct: 363 QRRGSIMPVDEDSSQFLIELRIAGTTKRRCAQLVWSHYTLVQKRN 407
>AE014297-1536|AAF54827.1| 442|Drosophila melanogaster CG5961-PA
protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 487 QRRDQLVSGGLV*SAHNLHIRLVGPTKRHCAE-VWFH*LRVPSRN 356
QRR ++ S + +R+ G TKR CA+ VW H V RN
Sbjct: 363 QRRGSIMPVDEDSSQFLIELRIAGTTKRRCAQLVWSHYTLVQKRN 407
>DQ831954-1|ABJ09069.1| 1223|Drosophila melanogaster SnoN protein.
Length = 1223
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 NAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLV 235
N K + I DQL E EL +MH + +KR A ML+
Sbjct: 302 NREKYQIILDQLKEVELKEMHKAQRELEHKKRKAEMLM 339
>DQ831953-1|ABJ09068.1| 1223|Drosophila melanogaster SnoN protein.
Length = 1223
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 NAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLV 235
N K + I DQL E EL +MH + +KR A ML+
Sbjct: 302 NREKYQIILDQLKEVELKEMHKAQRELEHKKRKAEMLM 339
>DQ831952-1|ABJ09067.1| 1223|Drosophila melanogaster SnoN protein.
Length = 1223
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 NAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLV 235
N K + I DQL E EL +MH + +KR A ML+
Sbjct: 302 NREKYQIILDQLKEVELKEMHKAQRELEHKKRKAEMLM 339
>DQ831951-1|ABJ09066.1| 958|Drosophila melanogaster SnoN2 protein.
Length = 958
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 NAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLV 235
N K + I DQL E EL +MH + +KR A ML+
Sbjct: 302 NREKYQIILDQLKEVELKEMHKAQRELEHKKRKAEMLM 339
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p
protein.
Length = 1074
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 197 PYIMRKRSATMLVCMFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTI 352
PY+ + F + LV+A + L + QY +G V Y+ FC +
Sbjct: 84 PYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPL 135
>AE014296-2186|AAF49883.1| 697|Drosophila melanogaster CG10969-PA
protein.
Length = 697
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -1
Query: 590 CQLY*FGNHE*NECGGHCQ*QRSFRRSPRCPVPHAAP*SAGQWRPRLKCSQSAHQ 426
CQ+ F + + HCQ Q R+P CP P + RL C Q Q
Sbjct: 603 CQMAPFQQQQQQQQMAHCQ-QIQSCRAPPCPPKKPPPCQQKHQQQRLSCQQQQQQ 656
>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 197 PYIMRKRSATMLVCMFLMALVVAATSIAGGVLLYRQYVRIGTVRRYQGFCTI 352
PY+ + F + LV+A + L + QY +G V Y+ FC +
Sbjct: 84 PYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPL 135
>AM282581-1|CAK54357.1| 1011|Drosophila melanogaster dSki protein
long isoform protein.
Length = 1011
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 NAHKPEAIADQLCEDELIDMHNIEGPYIMRKRSATMLV 235
N K + I DQL E EL +MH + +KR A ML+
Sbjct: 295 NRVKYQIILDQLKEVELKEMHKAQRELEHKKRKAEMLM 332
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,949,889
Number of Sequences: 53049
Number of extensions: 645708
Number of successful extensions: 1701
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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