Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o22r
         (734 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29863-1|AAA35820.1|  346|Homo sapiens protein ( Human farnesyl ...    97   8e-20
J05262-1|AAA52423.1|  353|Homo sapiens FDPS protein.                   97   8e-20
D14697-1|BAA03523.2|  420|Homo sapiens KIAA1293 protein.               97   8e-20
BC010004-1|AAH10004.1|  419|Homo sapiens farnesyl diphosphate sy...    97   8e-20
AL139410-1|CAI12715.1|  419|Homo sapiens farnesyl diphosphate sy...    97   8e-20
Z47055-1|CAA87327.1|  348|Homo sapiens farnesyl pyrophosphate sy...    86   1e-16
BC050292-1|AAH50292.1|  298|Homo sapiens LOC619190 protein protein.    73   1e-12

>M29863-1|AAA35820.1|  346|Homo sapiens protein ( Human farnesyl
           pyrophosphate synthetase mRNA (hpt807), 3' end. ).
          Length = 346

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC+WL V  LQRATP Q QI+++NYG  + E +AR+K LYEEL LP  +  
Sbjct: 250 KIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQ 309

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 310 YEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKR 344


>J05262-1|AAA52423.1|  353|Homo sapiens FDPS protein.
          Length = 353

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC+WL V  LQRATP Q QI+++NYG  + E +AR+K LYEEL LP  +  
Sbjct: 257 KIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQ 316

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 317 YEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKR 351


>D14697-1|BAA03523.2|  420|Homo sapiens KIAA1293 protein.
          Length = 420

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC+WL V  LQRATP Q QI+++NYG  + E +AR+K LYEEL LP  +  
Sbjct: 324 KIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQ 383

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 384 YEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKR 418


>BC010004-1|AAH10004.1|  419|Homo sapiens farnesyl diphosphate
           synthase (farnesyl pyrophosphate synthetase,
           dimethylallyl protein.
          Length = 419

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC+WL V  LQRATP Q QI+++NYG  + E +AR+K LYEEL LP  +  
Sbjct: 323 KIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQ 382

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 383 YEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKR 417


>AL139410-1|CAI12715.1|  419|Homo sapiens farnesyl diphosphate
           synthase (farnesyl pyrophosphate synthetase,
           dimethylallyl protein.
          Length = 419

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC+WL V  LQRATP Q QI+++NYG  + E +AR+K LYEEL LP  +  
Sbjct: 323 KIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQ 382

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 383 YEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKR 417


>Z47055-1|CAA87327.1|  348|Homo sapiens farnesyl pyrophosphate
           synthetase like-4 protein.
          Length = 348

 Score = 86.2 bits (204), Expect = 1e-16
 Identities = 41/95 (43%), Positives = 56/95 (58%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           K GTD QD KC  L V  L RATP Q QI+++NYG  + E + R+K LYEEL LP  +  
Sbjct: 252 KIGTDIQDXKCNCLXVQCLXRATPEQYQILKENYGQKEAEKVPRVKALYEELDLPAVFLQ 311

Query: 552 FEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 448
           +EE +Y  +   I+Q    LP  +F  +   I++R
Sbjct: 312 YEEDSYSHIMALIEQYAAPLPPAVFLGLARQIYKR 346


>BC050292-1|AAH50292.1|  298|Homo sapiens LOC619190 protein protein.
          Length = 298

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = -3

Query: 732 KYGTDXQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSV 553
           + G D QD KC+WL V  L +ATP Q QI+++NY   + E +AR+K LYEEL LP  +  
Sbjct: 225 RVGNDFQDNKCSWLVVQCLLQATPEQYQILKENYRQKEAEKVARVKALYEELDLPAVFLQ 284

Query: 552 FEETTY 535
           +E+ +Y
Sbjct: 285 YEKDSY 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,439,428
Number of Sequences: 237096
Number of extensions: 1487613
Number of successful extensions: 2622
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)