Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o15r
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   160   1e-41
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    54   1e-09
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    43   3e-06

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  160 bits (389), Expect = 1e-41
 Identities = 71/85 (83%), Positives = 84/85 (98%)
 Frame = -1

Query: 702 DPDNFLPERSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRVISDLKESDF 523
           DPDNFLPE++ANRHYYAFVPFSAGPRSCVGRKYAMLKLK++LSTILRNFRV SD+KES+F
Sbjct: 461 DPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESEF 520

Query: 522 KLQADIILKRAEGFQVRLQPRKRMA 448
           +LQADIILKRA+GF++RL+PRK++A
Sbjct: 521 RLQADIILKRADGFKIRLEPRKQVA 545


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 54.4 bits (125), Expect = 1e-09
 Identities = 23/58 (39%), Positives = 37/58 (63%)
 Frame = -1

Query: 723 FTQSNQXDPDNFLPERSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRV 550
           +   +  DP+ F  +  A+RH   ++PF  GPR+C+G ++A+ + KV L TILRN +V
Sbjct: 410 YPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 43.2 bits (97), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = -1

Query: 717 QSNQXDPDNFLPER---SANRHYYAFV-PFSAGPRSCVGRKYAMLKLKVILSTILRNFRV 550
           + N  D   +LPER       H    V PF AG R C G+++  L L++IL+ I+R F +
Sbjct: 430 EENFKDAKKYLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEI 489

Query: 549 ISDLKESDFKLQADIIL 499
           I    E +  LQ + IL
Sbjct: 490 I---VEEELDLQFEFIL 503


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,533
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)