Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o15f
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    80   2e-17
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    80   2e-17
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    80   2e-17
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    80   2e-17
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    29   0.040
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.0  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 79.8 bits (188), Expect = 2e-17
 Identities = 34/82 (41%), Positives = 52/82 (63%)
 Frame = +2

Query: 323 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVL 502
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P FH N+L
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKILTPAFHFNIL 139

Query: 503 KSFIDLFNANSRAVVDKLKKEA 568
           + FI +FN  ++ +V+ L+ E+
Sbjct: 140 QEFIQIFNEETKRLVEDLEAES 161


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 79.8 bits (188), Expect = 2e-17
 Identities = 31/79 (39%), Positives = 52/79 (65%)
 Frame = +2

Query: 329 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKS 508
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P FH ++L+ 
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFHFSILQQ 148

Query: 509 FIDLFNANSRAVVDKLKKE 565
           F+ +FN  +  +V+ LK+E
Sbjct: 149 FVAIFNEETDKLVEVLKEE 167


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 79.8 bits (188), Expect = 2e-17
 Identities = 31/79 (39%), Positives = 52/79 (65%)
 Frame = +2

Query: 329 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKS 508
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P FH ++L+ 
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFHFSILQQ 148

Query: 509 FIDLFNANSRAVVDKLKKE 565
           F+ +FN  +  +V+ LK+E
Sbjct: 149 FVAIFNEETDKLVEVLKEE 167


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 79.8 bits (188), Expect = 2e-17
 Identities = 34/81 (41%), Positives = 51/81 (62%)
 Frame = +2

Query: 323 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVL 502
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P FH N+L
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRRKILTPAFHFNIL 139

Query: 503 KSFIDLFNANSRAVVDKLKKE 565
           + FI +FN  ++ +V+ L+ E
Sbjct: 140 QEFIQIFNEETKRLVEDLEAE 160


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 0.040
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 407 KPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVD 550
           +P L   L    G+KW+  R  ++P F  + +K+   L +  +   VD
Sbjct: 69  EPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVD 116


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 258 FRKALTTITNPSLRSG 305
           FR+ L    NPSLR G
Sbjct: 23  FRRGLRLHDNPSLREG 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,120
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)