Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11o14f
(588 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 64 8e-11
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 55 4e-08
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 47 1e-05
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 32 0.30
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) 32 0.40
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11) 29 2.1
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 29 3.7
SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 29 3.7
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 3.7
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 26 4.3
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 4.9
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 28 6.5
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 64.1 bits (149), Expect = 8e-11
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 62 MASGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQ 232
M +G+ + + EIKK RY++F + ++K+ V + E +E L+DL
Sbjct: 247 MEAGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP 306
Query: 233 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 412
E RY + +Y + E + + KL L+ WCPD ++K +M+ +++F +KK
Sbjct: 307 ---ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKK 358
Query: 413 LVGVQKYIQATDLSEASQEAVEEKLR 490
G K ++ + SE S EA++E+L+
Sbjct: 359 CPGGAKCLEIQERSELSFEALKEELK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 58.4 bits (135), Expect = 4e-09
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 68 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 238
+G+ + + EIK RY +F + ++K+ V + E ++ L+DL
Sbjct: 2 AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59
Query: 239 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 418
T E RY + +Y ++ E +++ KL L+ WCPD +K KM+ +++F + K
Sbjct: 60 -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCP 113
Query: 419 GVQKYIQATDLSEASQEAVEEKLR 490
G K ++ D + S EA++EKL+
Sbjct: 114 GGAKCLEIQDRFDLSFEALKEKLK 137
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +2
Query: 68 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 214
SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 215 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSF 394
LE L E RY L+D + + + L + WC D A +KK+M+ +++
Sbjct: 64 MLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMVSAATN 115
Query: 395 DALKKSLVGVQKYIQATDLSEASQEAVEEK 484
+ LK V V+K Q D ++ + + + +K
Sbjct: 116 ELLKTKFV-VKKVFQINDRADLNYDDIADK 144
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Frame = +2
Query: 68 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 226
SG+ V D + +K K H+Y +F I DE + V ++V E ++ F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 227 LQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALK 406
++K E RY L+D ++ + E L +SWC D A ++KKM +S+ D ++
Sbjct: 64 VEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKMKLASTQDYVR 119
Query: 407 KSLVGVQKYIQATDLSEASQEAVEEKLRAT 496
K + A D + + + K T
Sbjct: 120 KKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 284 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 457
H+ Q A FL C D A +KKKML S+++ LKK G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 319
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 83 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 319
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190
>SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)
Length = 1226
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 494 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 339
W G + R PP RS+ TS L TF ERR W P T+
Sbjct: 855 WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 319
D E GER + +L+DL++ C YG + E T+ G +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473
>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 345 HHDIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS 223
H + + +C+ S V +C +S +RPY HSPV P+C S
Sbjct: 130 HSPVDRPYCY---SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 342 HDIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 187
H + +C S V +C YS +RPY HSPV P+C S R YS + P
Sbjct: 95 HSWSRPYCH---SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -2
Query: 488 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 321
G + R PP R + TS L TF ERR W P T +G AS
Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705
>SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)
Length = 597
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 161 EKQIDVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 319
E ++ GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 222 EVRLGRRLTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 277
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/84 (19%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 173 DVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPD 352
+VET E++ + E+ +++ ++ G E + L FE TH+ T ++ +
Sbjct: 151 EVETTTEQDKQPEEVVKNSEEEGNHEDQEPLLSFEDTHEDPETKPVEGEEPALYQKVTEE 210
Query: 353 -TAKVKKKMLYSSSFDALKKSLVG 421
+A+++++ +A++++++G
Sbjct: 211 PSAEIEQEKKDDEEDNAMEEAILG 234
>SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1690
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 395 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATK 538
D LKK + +QK +L +AS E EEK + + + F H++A K
Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVANK 445
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 353 CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHICI 249
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 189 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 224
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 353 CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHICI 249
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 1002 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 1037
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 26.2 bits (55), Expect(2) = 4.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 478 REAPRHRSPINSIYTRARDETEPALRHSCPDDTRPRH 588
R+AP HR+P + E+ PA +H+ T R+
Sbjct: 425 RQAPGHRTPDRHTHNNHAPESYPAAQHTPEHLTNTRN 461
Score = 20.6 bits (41), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 319 TEALPDVVVPGHR 357
TE PD PGHR
Sbjct: 419 TEYYPDRQAPGHR 431
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 198 TPNTNSSSRICRRAVPGNADMAC 266
+P T SSR C VPG+AD C
Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 464 QEAVEEKLRATDRQ*TAFTHEL--ATKPNPLSDTPALTTRGH 583
+E K+ AT+ AFTH+L KP +SD P + +G+
Sbjct: 22 EETPPIKIEATNHHAKAFTHDLENLAKPLKVSDVPNVFLQGY 63
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +1
Query: 394 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDE 537
RRS + PCR S +D LG R R SP S T E
Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNRE 285
>SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 356 RCPGTTTSG-RASVSC*PPTCPGTGAC 279
+CP T + G R V C P CP T C
Sbjct: 484 QCPKTLSCGHRCGVECHPGACPDTLVC 510
>SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 514 CCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS---VERARVQHLLLNLGG 353
CC+L + E L + +GR D + + G F + R +HL+ +GG
Sbjct: 85 CCILRMSMTEALAGATINAAASLGRADTHGSLEVGKFADMVVINAERWEHLIYQIGG 141
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3
Query: 520 CKCCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS 398
C CLL G + L DGL RR G ++VLL D G +S
Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384
>SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 386 SSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATKPN 544
SSF A + L+ Y + TD E + ++ + ATD T+ H +P+
Sbjct: 244 SSFTAEIRDLIETSSYTKDTDFDEETSSLLKSQTDATDDTMTSDEHCRTQEPS 296
>SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 285 CVYSKSNRPYLHSPVPPFCRSSRNCSYSALRS 190
CVY PY+ S +PP +S S LRS
Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,907
Number of Sequences: 59808
Number of extensions: 349489
Number of successful extensions: 1262
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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