Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o13r
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p pro...    30   3.9  
BT003321-1|AAO25081.1|  753|Drosophila melanogaster AT12755p pro...    29   9.0  
AY113190-1|AAM29195.1|  764|Drosophila melanogaster AT01046p pro...    29   9.0  
AY094638-1|AAM10991.1|  753|Drosophila melanogaster AT08991p pro...    29   9.0  

>AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p
           protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = -3

Query: 676 HIMDIQVLKNDIMPIPNTLKNESKSTFQASICTVRPHGKALRFRLYLLRSNYAFRLKRSI 497
           H++++  LKN++  + ++L+N        SI  ++      R ++Y L  N   R KR +
Sbjct: 37  HVIELTELKNNLNKLESSLQNLQDEDSNDSITPIQRKIDQAREKIYSLTPNR--REKRGL 94

Query: 496 IYSLSNLFE 470
           I  L N+ +
Sbjct: 95  IDGLGNVIK 103


>BT003321-1|AAO25081.1|  753|Drosophila melanogaster AT12755p
           protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 628 NTLKNESKSTFQASICTVRPHGKALR 551
           NT+ NESK    +SIC  RP G++ R
Sbjct: 313 NTMINESKLFPSSSICPCRPEGESKR 338


>AY113190-1|AAM29195.1|  764|Drosophila melanogaster AT01046p
           protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 628 NTLKNESKSTFQASICTVRPHGKALR 551
           NT+ NESK    +SIC  RP G++ R
Sbjct: 324 NTMINESKLFPSSSICPCRPEGESKR 349


>AY094638-1|AAM10991.1|  753|Drosophila melanogaster AT08991p
           protein.
          Length = 753

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 628 NTLKNESKSTFQASICTVRPHGKALR 551
           NT+ NESK    +SIC  RP G++ R
Sbjct: 313 NTMINESKLFPSSSICPCRPEGESKR 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,676,946
Number of Sequences: 53049
Number of extensions: 489733
Number of successful extensions: 933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)