Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o13f
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061433-1|AAL28981.1|  212|Drosophila melanogaster LD36173p pro...    83   2e-16
AE014296-929|AAF50800.1|  212|Drosophila melanogaster CG4618-PA ...    83   2e-16
BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p pro...    55   5e-08
AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p pro...    55   5e-08
AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-P...    55   5e-08

>AY061433-1|AAL28981.1|  212|Drosophila melanogaster LD36173p
           protein.
          Length = 212

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = +2

Query: 92  LVSDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVSRNKIGQSTTDADKDI 271
           +++DTLDD+++ESGDEEES  +VN+VLDEIGIEISGKM+  P+   +    S    +KDI
Sbjct: 143 MINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPATGSSDFETSGKRTEKDI 202

Query: 272 MAQLAKLKST 301
             QLAKL+S+
Sbjct: 203 ADQLAKLRSS 212


>AE014296-929|AAF50800.1|  212|Drosophila melanogaster CG4618-PA
           protein.
          Length = 212

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = +2

Query: 92  LVSDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVSRNKIGQSTTDADKDI 271
           +++DTLDD+++ESGDEEES  +VN+VLDEIGIEISGKM+  P+   +    S    +KDI
Sbjct: 143 MINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPATGSSDFETSGKRTEKDI 202

Query: 272 MAQLAKLKST 301
             QLAKL+S+
Sbjct: 203 ADQLAKLRSS 212


>BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p
           protein.
          Length = 256

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +2

Query: 92  LVSDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVS 226
           +++D +DD M++ GDEEE+  +V+QVLDE+G+++  ++ D PS S
Sbjct: 142 MINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSAS 186


>AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p
           protein.
          Length = 243

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +2

Query: 92  LVSDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVS 226
           +++D +DD M++ GDEEE+  +V+QVLDE+G+++  ++ D PS S
Sbjct: 129 MINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSAS 173


>AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-PA
           protein.
          Length = 256

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 20/45 (44%), Positives = 35/45 (77%)
 Frame = +2

Query: 92  LVSDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVS 226
           +++D +DD M++ GDEEE+  +V+QVLDE+G+++  ++ D PS S
Sbjct: 142 MINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSAS 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,728,713
Number of Sequences: 53049
Number of extensions: 351109
Number of successful extensions: 869
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)