Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11o11r
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 82 4e-16
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 44 1e-04
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 38 0.006
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 38 0.006
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 38 0.006
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 38 0.007
Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 30 1.5
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 30 1.5
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 29 4.6
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 28 6.0
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine re... 28 8.0
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 8.0
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELK 544
I K+DATAND P F+V GFPT+FW PK++ P YNGGR ++DF+ ++S+ +T LK
Sbjct: 416 IAKMDATANDVPP-MFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLK 474
Query: 543 GWDRKGNAKQGKE 505
G+ R G K+ E
Sbjct: 475 GFSRDGKKKKKTE 487
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 559
++K+D T +F V GFPT+ K + Q Y+G R + +K++ Q+
Sbjct: 75 LVKVDCTTEKTVCDKFGVKGFPTL--KIFRNGVPAQDYDGPRDADGIVKFMRGQS 127
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELK 544
I K+DATAND P F+V GFPT+FW PK++ P YNGGR ++DF+ ++S+ +T LK
Sbjct: 416 IAKMDATANDVPP-MFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLK 474
Query: 543 GWDRKGNAKQGKE 505
G+ R G K+ E
Sbjct: 475 GFSRDGKKKKKTE 487
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 559
++K+D T +F V GFPT+ K + Q Y+G R + +K++ Q+
Sbjct: 75 LVKVDCTTEKTVCDKFGVKGFPTL--KIFRNGVPAQDYDGPRDADGIVKFMRGQS 127
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELK 544
+ K+DAT ND P SQF V GFPTI++ P +P +Y+G R LED K++++ +
Sbjct: 555 LAKMDATINDAP-SQFAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMTKHGVKSFQ 613
Query: 543 GWD 535
D
Sbjct: 614 KKD 616
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTI-FWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSEL 547
+ K+DAT +F++ G+PT+ FWK K P Y+GGR +++V +
Sbjct: 86 LAKVDATVETELGKRFEIQGYPTLKFWK---DGKGPNDYDGGRDEAGIVEWVESRVDPNY 142
Query: 546 K 544
K
Sbjct: 143 K 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSELK 544
K+DAT +++ VSG+PT+ K + ++ YNG R IKY+++Q+ K
Sbjct: 204 KVDATIEKDLGTKYGVSGYPTM--KIIRNGRRFD-YNGPREAAGIIKYMTDQSKPAAK 258
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 559
+ K+DAT N S+F+V G+PTI + S KP +Y GGRA + +V +++
Sbjct: 78 LAKVDATENQALASKFEVRGYPTILY---FKSGKPTKYTGGRATAQIVDWVKKKS 129
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 723 IIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 559
+ K+DAT N S+F+V G+PTI + S KP +Y GGRA + +V +++
Sbjct: 78 LAKVDATENQALASKFEVRGYPTILY---FKSGKPTKYTGGRATAQIVDWVKKKS 129
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 714 IDATANDWPKSQFDVSGFPTI-FWKPKDSS-KKPQRYNGGRALEDFIKYVSEQ 562
+DATA++ +F + GFPTI F+ P SS + Y GGR D I Y +
Sbjct: 210 LDATAHESIAQKFGIRGFPTIKFFAPGTSSASDAEDYQGGRTSTDLISYAESK 262
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = -3
Query: 729 SDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGR---ALEDFIKYVSEQA 559
++I IDAT + ++ + G+PTI KP YNG R + D +K E++
Sbjct: 75 AEIGAIDATVHQKIPLKYSIKGYPTIKIFGATEKSKPIDYNGPRTAKGIADAVKKSIEKS 134
Query: 558 TSE-LKGWDRKGNAKQGKE 505
+ LKG + + K K+
Sbjct: 135 LEQRLKGKSSEKSKKSDKK 153
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 562
K+DAT + S+F+V G+PT+ + KPQ YNGGR + I ++ ++
Sbjct: 80 KLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAWLKKK 128
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 562
K+DAT + S+F+V G+PT+ + KPQ YNGGR + I ++ ++
Sbjct: 80 KLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAWLKKK 128
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 562
K+DAT + S+F+V G+PT+ + KPQ YNGGR + I ++ ++
Sbjct: 80 KLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAWLKKK 128
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 714 IDATANDWPKSQFDVSGFPTI-FWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSEL 547
+DAT + ++F + GFPTI ++ P Q Y+GGR D + + S +A +
Sbjct: 220 LDATVHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASARAQENM 276
>Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical
protein F08H9.12 protein.
Length = 320
Score = 31.1 bits (67), Expect = 0.86
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +1
Query: 67 LIYHPQVEVYQYTTYDNTSD-FYKNVYYFLTKRSKML-SYICAPYTESNER*NCVYASVL 240
LIY P + V + ++ ++ Y + Y F M + PY SN NC S+L
Sbjct: 199 LIYIPVMIVTRKNSHQHSQQHIYLHEYVFFQSCLVMFFKLVTLPYFLSNLEYNCASTSML 258
Query: 241 FCKSSKVILDLLSVNMMVNECNITIARGTTMSLYPKNAFHICFPLDRYNTHKLRSHISLF 420
+ V+ L + + +CNI S + F + F + H S I+
Sbjct: 259 SMSLADVVTTPLIIQLSYLKCNIHDVICLFFSFDIQKYFRVVFGNVENSVHPNLSRIAFS 318
Query: 421 FT 426
T
Sbjct: 319 IT 320
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 562
++D T N +F V+ PTI+ KD + +Y+G R DFI +V ++
Sbjct: 77 EVDVTVNPGLSGRFLVTALPTIY-HVKDGVFR--QYSGARDKNDFISFVEDK 125
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 717 KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 562
++D T N +F V+ PTI+ KD + +Y+G R DFI +V ++
Sbjct: 77 EVDVTVNPGLSGRFLVTALPTIY-HVKDGVFR--QYSGARDKNDFISFVEDK 125
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 740 KDEEVTSLRSMQLQMTGPNHNSTFPASPQSSGSLRTAPRN 621
+DE++++ S LQ TGP H + Q SGS P+N
Sbjct: 7 RDEQISASSSFDLQSTGPQH----ARAHQESGSGAWCPKN 42
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 740 KDEEVTSLRSMQLQMTGPNHNSTFPASPQSSGSLRTAPRN 621
+DE++++ S LQ TGP H + Q SGS P+N
Sbjct: 37 RDEQISASSSFDLQSTGPQH----ARAHQESGSGAWCPKN 72
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 626 LELSLGFQKIVGKPETSNCDLGQSFAVASILMMSLLH 736
+ S KIVG+ + S + QSFA+ +LM LH
Sbjct: 1 MTFSKQISKIVGRSKRSEMNTFQSFAIVLLLMFCKLH 37
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 725 TSLRSMQLQMTGPNHNSTFPASPQSSGSLRTAPRNLRD-IMEDVL*RTSSSMFLNKPQAN 549
TSL + +Q + + S+ PA+ L+ + + + +++ RT+SS +KP+
Sbjct: 309 TSLETTIMQASSASPISSKPATTTEPSPLQASSKPATEPLLQPESARTASSSASSKPEVQ 368
Query: 548 LRAGTERVTPNKERKSCRRAVVI 480
TE TP+ S + + +
Sbjct: 369 TTIPTEIQTPSLRTSSLKTSTTV 391
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 401 EVIFHCFSHYIHPSHKYTRRSFMESFESQQHAYNSS 508
+++F C HY P++ Y +F SF H Y S
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF-IHSHDYRHS 165
>AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 23 protein.
Length = 293
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 306 HYYCKRNDNVSVPKECFSYLLSLGQI*HT*TQKSYFIVFHITFILHTNTHADLSWKVLNH 485
+Y+C N ++ P+ C + S+ KS ++F +TF + L WKV
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203
Query: 486 NS 491
++
Sbjct: 204 DN 205
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 399 QKSYFIVFHITFILHTNTHADLSWKVLN 482
Q S IVFH FILH ++ D S LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,694,696
Number of Sequences: 27780
Number of extensions: 392942
Number of successful extensions: 1338
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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