Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11o11f
(566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 111 5e-26
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 81 8e-17
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 5e-10
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 43 3e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 4e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 37 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.005
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 1.1
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 2.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 5.9
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 25 7.7
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 111 bits (268), Expect = 5e-26
Identities = 52/123 (42%), Positives = 78/123 (63%)
Frame = +1
Query: 163 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPP 342
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD--G 72
Query: 343 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 522
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 523 KEL 531
K +
Sbjct: 132 KPI 134
Score = 66.1 bits (154), Expect = 3e-12
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Frame = +1
Query: 178 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALA 354
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A D V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVA 411
Query: 355 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 522
K+D TE S S+SG+PT+ F+ + + Y G R + ++ A P
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467
Query: 523 KE 528
KE
Sbjct: 468 KE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 81.4 bits (192), Expect = 8e-17
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Frame = +1
Query: 100 KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 279
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 280 CKRLKPEYAVAAGLLKTDVPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 444
CK+L P Y A L + +P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 445 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 537
S++YNG R + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.8 bits (136), Expect = 5e-10
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +1
Query: 187 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 363
+V++L +F V+ LV FYA WCG+CKRL P Y + K + P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN 199
Query: 364 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVG 513
+ V+ +PT+K F K + Y G R +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 58.0 bits (134), Expect = 9e-10
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +1
Query: 244 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTL 423
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 424 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 534
F G +Y+ R+ + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 43.2 bits (97), Expect = 3e-05
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +1
Query: 199 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV--PPVALAKVDCTE 372
LTD+D + +S+ T + +Y P CG CKRL P + K V +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 373 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSS 522
S+C ++ PTL +++ GE+ E + ++ ++ + P +
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDT 138
Score = 39.9 bits (89), Expect = 3e-04
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = +1
Query: 205 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKS 384
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLN---VAHINCAVS-KR 343
Query: 385 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 495
C+Q+S+ +PT +F K E EY G +V +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 208 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKST 387
S+F +++ Q +V F+A WCG CK + P++ KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFE----QFSNTYSDATFIKVDVDQLSEIA 64
Query: 388 CEQFSVSGYPTLKIFRKGELSSEYNG 465
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 211 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTC 390
D++ +S +V FYA WCG CK LKP L + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 391 EQFSVSGYPTLKIFRKGE 444
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 259 YAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 438
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 439 GE 444
G+
Sbjct: 84 GK 85
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +1
Query: 247 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 426
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 427 IFRKGELSSEYNG 465
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 191 FSILQIPTFRLFYLNMIQPWSCF 259
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 5.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 181 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKT 330
EE V+D+ + D +AVL L + +P+ CK P+ V A +L+T
Sbjct: 324 EEAVIDVDELDKNAVLFGGTRVLQVTQSPF---CKLKTPDNGVPAIVLRT 370
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 157 IIYLCKAAEEDVLDLTDSDFSAVLSQHD 240
+IY C+AA+E++LD LS+ D
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRD 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,320,169
Number of Sequences: 5004
Number of extensions: 46061
Number of successful extensions: 134
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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