Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o08f
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.61 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   4.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 314 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFH-PNVYADGGICLDILQN 454
           F D  +K+  +FT  + N    ++F+S   H    ++ GG   DI +N
Sbjct: 700 FVDRCYKMQEQFTLNFRNSDELIKFISIAKHNVRTFSAGGF-FDIRKN 746


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 263  NNIMIWNAVIFGPHDTPFEDGT 328
            N ++    VI+GP DT F++ T
Sbjct: 1130 NGVIKGYKVIYGPSDTWFDENT 1151


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 458 WSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQ 556
           WSP    +A  T  +   + P P+ P+ S   Q
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDPSVSSCHQ 140


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 485 ILTSIQSLLSDPNPNSPANSMA 550
           +L  I +LLSD NP +  N+ A
Sbjct: 213 MLPIIHNLLSDKNPPNTENNCA 234


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 374 PTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDV 478
           P+V F+S+    ++   GG  L    N     YDV
Sbjct: 60  PSVHFISRTLGQDLITTGGYTLPKESNAIIHIYDV 94


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 176 STPARRRLMRDFKRLQEDPP 235
           +TP   +LM D K+ Q D P
Sbjct: 57  NTPEILQLMSDLKQHQSDDP 76


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 317 EDGTFKLTIEFTEEYPNKPPTV 382
           EDGT K       +  NKP T+
Sbjct: 225 EDGTDKFMSHIHNDGDNKPDTI 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,782
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)