Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o06r
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O77372 Cluster: Putative uncharacterized protein MAL3P6...    36   1.3  
UniRef50_Q8IEQ5 Cluster: Putative uncharacterized protein MAL13P...    34   4.0  
UniRef50_Q8IB56 Cluster: Putative uncharacterized protein MAL8P1...    33   5.2  
UniRef50_Q7YYX3 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  
UniRef50_A5D5B8 Cluster: Hypothetical membrane protein; n=1; Pel...    33   9.2  

>UniRef50_O77372 Cluster: Putative uncharacterized protein MAL3P6.23;
            n=3; Eukaryota|Rep: Putative uncharacterized protein
            MAL3P6.23 - Plasmodium falciparum (isolate 3D7)
          Length = 4981

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 34/130 (26%), Positives = 60/130 (46%)
 Frame = -1

Query: 602  LKKLILFYASQCMKKTTFFTYLYLNI*IIYNFKQQNKEKNILL*YDVVEADYVNLTK*IL 423
            + KL+L+  ++   K TF  Y+Y  + I +N    N   N  +        Y N ++  +
Sbjct: 635  ISKLLLYINNEEYVKKTFEVYIYYFL-IFFNSTIINSYNNYAMEIHDTSCIYNNDSQIDI 693

Query: 422  KEFAFL*LT**LTIIVSLFYKNIMYRLTKIDRHLIIIFENNSENKMCIHMYYIH*VNIRN 243
                   +     II++ F   +   L K+  HLI++F NN        +Y +   NI N
Sbjct: 694  NYINLKNIP--NYIIINSFRIILQSCLNKV--HLIVVFTNNILKISYALLYILINKNI-N 748

Query: 242  TTNCGHVIDL 213
            T+NCG++I++
Sbjct: 749  TSNCGNIIEV 758


>UniRef50_Q8IEQ5 Cluster: Putative uncharacterized protein MAL13P1.29;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL13P1.29 - Plasmodium
            falciparum (isolate 3D7)
          Length = 1341

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +3

Query: 9    FTFIHYIIEIKNLQIMNYLFQMNNFRI*---LI*IVNSTPLIFVLIGTRRQIFFLYIYLH 179
            + FIH  +   NL I   L + N F      L+ +     ++++LI  +  IFF+  Y +
Sbjct: 956  YLFIHIFVYTLNLIIFFKLLKTNIFHSQNNQLLQMKGIFCILYILI-VQIYIFFINNYFY 1014

Query: 180  SFLMTTLNVNV*IYDMAAICRIPNINLVYIIHMYTHFVFRVIFKNN 317
             FL   +  N  I DM        INL+++IH        +IFKNN
Sbjct: 1015 FFLKKNIKNN--ISDM------DKINLIHVIHQLFPQYDNMIFKNN 1052


>UniRef50_Q8IB56 Cluster: Putative uncharacterized protein
           MAL8P1.49; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.49 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1466

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 13/217 (5%)
 Frame = -1

Query: 623 HFNINNTLKKLILFYASQCMKKTTFFTYLYLNI*IIYNFKQQNKEKNILL*YDVVEADYV 444
           H NIN   KK+ ++Y  + + +    +Y + +I   Y  K +N+ ++I L     +  Y+
Sbjct: 272 HNNINK--KKIYIYYYIKYLLQKKNNSYNF-SINRFYYIKHRNRTQDIFLNIPKKKNIYI 328

Query: 443 -----NLTK*ILKEFAFL*LT**LTIIVSLFYKNIMYRLTKI-DRHLIIIF-----ENNS 297
                N  K ++ +F +        ++ S+FY  I   L  + D ++  ++       N 
Sbjct: 329 FSVNINSFKCVINKFIYNDFY--YNLLNSIFYSIINIPLQYVCDTYIYYLYCYDSDLKND 386

Query: 296 ENKMCIHMYYIH*VN--IRNTTNCGHVIDLNIYI*SCH*KGMKVYVKKKNLSTCTY*NKY 123
           EN +C+H  Y + +N  + N  N    ++ N  I   +   +  Y    ++    Y + Y
Sbjct: 387 ENLLCVHEEYNNNINKNMENNNNINKNMENNNNI---NKNMVNNYNNNNDIYNDIYNDIY 443

Query: 122 *WR*INYLYKLYPKIIHLEQIIHYL*VFNLNNVMNKC 12
            +   N++Y  Y  I +   I +Y  ++N NN  +KC
Sbjct: 444 NY---NHIYN-YNHIYNYNHIYNYNHIYNDNNKTDKC 476


>UniRef50_Q7YYX3 Cluster: Putative uncharacterized protein; n=2;
           Apicomplexa|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum
          Length = 80

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = -3

Query: 630 VITFQY*QYLKKTNIVLCISMYEKNNIFYLSLFKHLNYIQF 508
           ++ F    YLK TN  L I+M+E N  FY  L   +NYI F
Sbjct: 15  ILIFCNIHYLKYTNTKLNITMFE-NFFFYFFLILQINYISF 54


>UniRef50_A5D5B8 Cluster: Hypothetical membrane protein; n=1;
           Pelotomaculum thermopropionicum SI|Rep: Hypothetical
           membrane protein - Pelotomaculum thermopropionicum SI
          Length = 599

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/91 (25%), Positives = 41/91 (45%)
 Frame = +3

Query: 24  YIIEIKNLQIMNYLFQMNNFRI*LI*IVNSTPLIFVLIGTRRQIFFLYIYLHSFLMTTLN 203
           +I+ IK  +I      MNN  + L+ I+ S  L F    T   I  L++YL   ++  + 
Sbjct: 219 FILLIKYNEICGKYSNMNNMSLSLLWIIVSVVLAFT--HTYMAIILLFVYLTWLIILYIY 276

Query: 204 VNV*IYDMAAICRIPNINLVYIIHMYTHFVF 296
           +       A I    N   +Y++ + TH ++
Sbjct: 277 MRFSDSGNAVISNFANTFSIYMVFVLTHLIW 307


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,275,241
Number of Sequences: 1657284
Number of extensions: 10997093
Number of successful extensions: 22831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22812
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)