Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o06f
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 255 IRVWNNNEKKFSKAQNQPMKLKGVFSTIVPSPVT 154
           IR+W  +  K    ++  + +K    ++VP+PVT
Sbjct: 131 IRLWGVSFSKKQILRSDDLAVKTTSKSLVPTPVT 164


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 331  WFRRPTSWWS 302
            W  +P++WWS
Sbjct: 1035 WTTKPSTWWS 1044


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 172 SPISCNVNHIEDFCL 128
           S   C++N I+ FCL
Sbjct: 373 SDFDCDINSIQYFCL 387


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = +1

Query: 328 TTNQKV--WGLWSIWLW 372
           TT++ V  WG WS + W
Sbjct: 22  TTDKVVCYWGTWSTYRW 38


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 614 NQPPLRHIIIIYFFLYF 564
           N+P LRH +I  F   F
Sbjct: 89  NEPKLRHYLIFIFVNVF 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,388
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)