Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o06f
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF058058-1|ABN51176.1|  658|Drosophila melanogaster NKAIN protein.     34   0.18 
AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p pro...    34   0.18 
AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC...    34   0.18 
AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB...    34   0.18 
AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA...    34   0.18 
AY128461-1|AAM75054.1|  369|Drosophila melanogaster RE15887p pro...    28   8.8  
AY060916-1|AAL28464.1|  369|Drosophila melanogaster GM06077p pro...    28   8.8  
AE014297-3926|AAF56576.2|  369|Drosophila melanogaster CG6073-PA...    28   8.8  

>EF058058-1|ABN51176.1|  658|Drosophila melanogaster NKAIN protein.
          Length = 658

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 170 TIVEKTPFSFMGWFWA--LLNFFSLLF 244
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


>AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p
           protein.
          Length = 452

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 170 TIVEKTPFSFMGWFWA--LLNFFSLLF 244
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


>AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC,
           isoform C protein.
          Length = 661

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 170 TIVEKTPFSFMGWFWA--LLNFFSLLF 244
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


>AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB,
           isoform B protein.
          Length = 661

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 170 TIVEKTPFSFMGWFWA--LLNFFSLLF 244
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


>AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA,
           isoform A protein.
          Length = 661

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
 Frame = +2

Query: 170 TIVEKTPFSFMGWFWA--LLNFFSLLF 244
           TI+E+  F F+G+ WA  L+NFF +LF
Sbjct: 22  TIIERQVFDFLGYMWAPILVNFFHILF 48


>AY128461-1|AAM75054.1|  369|Drosophila melanogaster RE15887p
           protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 381 HHLWEAAAVVDNGCLQSCDNI 443
           +H WEA    D+ CL +C+N+
Sbjct: 306 YHKWEAKVGKDSDCLLACENV 326


>AY060916-1|AAL28464.1|  369|Drosophila melanogaster GM06077p
           protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 381 HHLWEAAAVVDNGCLQSCDNI 443
           +H WEA    D+ CL +C+N+
Sbjct: 306 YHKWEAKVGKDSDCLLACENV 326


>AE014297-3926|AAF56576.2|  369|Drosophila melanogaster CG6073-PA
           protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 381 HHLWEAAAVVDNGCLQSCDNI 443
           +H WEA    D+ CL +C+N+
Sbjct: 306 YHKWEAKVGKDSDCLLACENV 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,238,892
Number of Sequences: 53049
Number of extensions: 395024
Number of successful extensions: 781
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)