Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11o05f
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-1|CAB05543.1|  733|Caenorhabditis elegans Hypothetical pr...    34   0.091
AF016513-1|AAB69446.1|  733|Caenorhabditis elegans Ce-LEA protein.     34   0.091
AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical ...    31   0.85 
AF068718-3|AAO21430.1|   82|Caenorhabditis elegans Cystatin-like...    31   0.85 
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    28   6.0  

>Z83113-1|CAB05543.1|  733|Caenorhabditis elegans Hypothetical
           protein K08H10.1 protein.
          Length = 733

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +1

Query: 376 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 555
           +KD      +KAG       D V EK   +  + + ++    DNV++ AS A++  K  +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609

Query: 556 SDYYQITTD 582
           SD +  T D
Sbjct: 610 SDAWDKTKD 618


>AF016513-1|AAB69446.1|  733|Caenorhabditis elegans Ce-LEA protein.
          Length = 733

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +1

Query: 376 SKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYS 555
           +KD      +KAG       D V EK   +  + + ++    DNV++ AS A++  K  +
Sbjct: 550 AKDKSKSLTEKAGDAISGAYDSVKEKASDIADSFKAHSTNSKDNVENKASDAYNSAKDKA 609

Query: 556 SDYYQITTD 582
           SD +  T D
Sbjct: 610 SDAWDKTKD 618


>AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical
           protein VF36H2L.1 protein.
          Length = 308

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +1

Query: 268 WQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKA 411
           W  +L  S+  +L L T  P  +  ++ +C    +LS+ A+F+ LKKA
Sbjct: 42  WLVSLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89


>AF068718-3|AAO21430.1|   82|Caenorhabditis elegans Cystatin-like
           protease inhibitorprotein 1, isoform b protein.
          Length = 82

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +1

Query: 214 TTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFF 393
           T G + +D    E+S +AW+     + +       N P YYA  +++C PY + ++D   
Sbjct: 23  TGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCDPYERGAEDRTA 77

Query: 394 IA 399
           +A
Sbjct: 78  LA 79


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 130 WASFVLLVSIAGLVAYDVSRAGGNFPK---STTGKLFKDLGILEHSQQ 264
           W+SF    S A L  YD+++A   F         K F+D+G  E ++Q
Sbjct: 178 WSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


>Z70783-1|CAA94852.2|  765|Caenorhabditis elegans Hypothetical
           protein ZK856.1 protein.
          Length = 765

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 208 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAP 327
           K   G L  +LG+LE+   A +K      R   +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 79  FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDV 183
           F+ I+D   +T   PWLWA ++L V +  LVA  V
Sbjct: 468 FQQIID---ATNEKPWLWAVYILCV-LLPLVAIGV 498


>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 558 TRVLFESAP--GRRCIALNVVYKTRSILFNGFNNDRR 454
           +RV+  SAP     C A  V + T+ ILF G +N RR
Sbjct: 183 SRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRR 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,961,400
Number of Sequences: 27780
Number of extensions: 327994
Number of successful extensions: 829
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)