Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n18r
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 38 0.005
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 38 0.005
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 38 0.005
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 38 0.005
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 38 0.005
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 38 0.005
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 37 0.016
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 36 0.021
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.028
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 36 0.028
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 36 0.028
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 36 0.028
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 36 0.037
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 36 0.037
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 36 0.037
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 35 0.049
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 35 0.049
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 35 0.049
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical pr... 35 0.065
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 35 0.065
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.11
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 34 0.11
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 34 0.11
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 34 0.11
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 34 0.11
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 34 0.11
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 34 0.11
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 34 0.11
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.15
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 33 0.15
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 33 0.15
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 33 0.15
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen pro... 33 0.20
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 33 0.26
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 33 0.26
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 33 0.26
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 33 0.26
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 33 0.26
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 33 0.26
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 32 0.35
U28739-1|AAK68186.2| 339|Caenorhabditis elegans Hypothetical pr... 32 0.35
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.35
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 32 0.35
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 32 0.35
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 32 0.46
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 32 0.46
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 32 0.46
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 31 0.61
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.61
U00025-2|ABA54414.1| 418|Caenorhabditis elegans Amp-activated k... 31 0.61
U00025-1|ABA54413.1| 589|Caenorhabditis elegans Amp-activated k... 31 0.61
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 31 0.61
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.61
AY347272-1|AAR06927.1| 589|Caenorhabditis elegans AMP-activated... 31 0.61
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 31 0.61
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 31 0.61
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.80
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 31 0.80
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 31 0.80
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.80
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.80
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 27 1.0
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.1
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 31 1.1
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 31 1.1
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 27 1.1
Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical pr... 30 1.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.4
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 1.4
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 30 1.4
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 30 1.9
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 30 1.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 1.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 2.4
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 2.4
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 2.4
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 2.4
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 2.4
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 29 2.4
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 29 2.4
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 29 2.4
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 2.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 2.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 2.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 3.2
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 3.2
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 3.2
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 3.2
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 3.2
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 3.2
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 3.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.2
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 3.2
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.2
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 3.2
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 4.3
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 29 4.3
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 29 4.3
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 29 4.3
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 29 4.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.3
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 4.3
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 4.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.3
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 5.7
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 28 5.7
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 28 5.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 7.5
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 7.5
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.9
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 27 9.9
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 9.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 9.9
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 27 9.9
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 27 9.9
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/54 (42%), Positives = 23/54 (42%)
Frame = +3
Query: 381 SASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
S RSI S P GP P GP P G GP GP GP P S GA
Sbjct: 162 SPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGA 215
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/54 (42%), Positives = 23/54 (42%)
Frame = +3
Query: 381 SASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
S RSI S P GP P GP P G GP GP GP P S GA
Sbjct: 162 SPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGA 215
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG-------PSMPG--GPCGPLGPRSHRQYPPSNGA 542
GP P GP P P G P PG GPCGP GP+ P NGA
Sbjct: 194 GPVGPHGPAGPAGPRGTRHSAGVPGKPGDVGPCGPEGPKGAPGTPGKNGA 243
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAV 545
GP P GP P+GP P GP GP G R P G V
Sbjct: 182 GPAGPAGPEGKDGPVGPHGPAGPAGPRGTRHSAGVPGKPGDV 223
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHR 518
G P GP P GP P GP GP GPR R
Sbjct: 179 GRPGPAGPAGPEGKDGPVGPHGPAGPAGPRGTR 211
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG-PSMPG--GPCGPLGP 506
P G RGP P P G P PG GP GP GP
Sbjct: 156 PDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGP 189
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 408 RDPLGPRAPRG-PLAP--VSPLGPSMPGGPCGPLGP 506
R P GP P G P P P GP+ P G GP+GP
Sbjct: 163 RGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGP 198
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGP 506
P GP P GP P P GP PG P GP GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
P GP P GP P SP GPS PG GP GP GP + P + G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP P GP P G GGP GP GP+
Sbjct: 221 GPAGPPGPAGPAGNDGAPGTGGP-GPAGPK 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP G P GP GP GP P ++G
Sbjct: 222 PAGPPGPAGPAGNDGAPGTGGP-GPAGPKGPPGAAGAPGADG 262
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 423 PRAPRGPLAPVSPL--GPSMPG--GPCGPLGPRSHRQYPPSNG 539
P AP GP P + GP PG GP GP GP + P + G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P +P GP P P GP P GP G G P GA
Sbjct: 173 PGSPAGPSGP-GPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGP 506
P GP P GP P P GP PG P GP GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
P GP P GP P SP GPS PG GP GP GP + P + G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP P GP P G GGP GP GP+
Sbjct: 221 GPAGPPGPAGPAGNDGAPGTGGP-GPAGPK 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP G P GP GP GP P ++G
Sbjct: 222 PAGPPGPAGPAGNDGAPGTGGP-GPAGPKGPPGAAGAPGADG 262
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 423 PRAPRGPLAPVSPL--GPSMPG--GPCGPLGPRSHRQYPPSNG 539
P AP GP P + GP PG GP GP GP + P + G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P +P GP P P GP P GP G G P GA
Sbjct: 173 PGSPAGPSGP-GPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GPR P GP P GP P G G +G YP G
Sbjct: 153 PNGPRGPTGPPGETGPSGPEGPPGNPGRIGEHGREGYPGQQG 194
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASS 554
G R +GP+ P GP GP G G R +G V S
Sbjct: 215 GTRGQKGPIGPKGDSGPPGQKGPSGYPGRDGQRGNDGESGPVGPS 259
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +3
Query: 408 RDPLGPRAPRGPLAPVSPLG-PSMPG-----GPCGPLGPRSHRQYPPSNGAV 545
+ P+GP+ GP P G P G G GP+GP P G +
Sbjct: 220 KGPIGPKGDSGPPGQKGPSGYPGRDGQRGNDGESGPVGPSGQLGMPGEPGQI 271
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 399 IKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
++ + P GPR P GP P P GP G GP GP
Sbjct: 244 MEKKSPPGPRGPPGPAGPDGPQGPEGRSGKQGPPGP 279
Score = 34.3 bits (75), Expect = 0.086
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
P + P P P GP+ P GP GP G RS +Q PP
Sbjct: 243 PMEKKSPPGPRGPPGPAGPDGPQGPEG-RSGKQGPP 277
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P GP P P G S GP GP G
Sbjct: 252 PRGPPGPAGPDGPQGPEGRSGKQGPPGPTG 281
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 408 RDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
R P GP P GP P G P GP G G
Sbjct: 253 RGPPGPAGPDGPQGPEGRSGKQGPPGPTGQEG 284
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGP 506
P GP P GP P P GP PG P GP GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
P GP P GP P SP GPS PG GP GP GP + P + G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP P GP P G GGP GP GP+
Sbjct: 221 GPAGPPGPAGPAGNDGAPGTGGP-GPAGPK 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP G P GP GP GP P ++G
Sbjct: 222 PAGPPGPAGPAGNDGAPGTGGP-GPAGPKGPPGAAGAPGADG 262
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 423 PRAPRGPLAPVSPL--GPSMPG--GPCGPLGPRSHRQYPPSNG 539
P AP GP P + GP PG GP GP GP + P + G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P +P GP P P GP P GP G G P GA
Sbjct: 173 PGSPAGPSGP-GPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGP 506
P GP P GP P P GP PG P GP GP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGP 182
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
P GP P GP P SP GPS PG GP GP GP + P + G
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP P GP P G GGP GP GP+
Sbjct: 221 GPAGPPGPAGPAGNDGAPGTGGP-GPAGPK 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP G P GP GP GP P ++G
Sbjct: 222 PAGPPGPAGPAGNDGAPGTGGP-GPAGPKGPPGAAGAPGADG 262
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 423 PRAPRGPLAPVSPL--GPSMPG--GPCGPLGPRSHRQYPPSNG 539
P AP GP P + GP PG GP GP GP + P + G
Sbjct: 200 PGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGG 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P +P GP P P GP P GP G G P GA
Sbjct: 173 PGSPAGPSGP-GPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLG-PSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSP 581
+P P P GP P P G P PG P GP G S + P N A S P P
Sbjct: 97 EPTKPTCPPGPPGPPGPAGQPGTPGAP-GPKGQDSTTTFAPINCPTAPSDCIKCAPGP 153
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 423 PRAPRGPL--APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P AP + AP P GP+ GP GP GP P S G
Sbjct: 140 PTAPSDCIKCAP-GPAGPAGSAGPAGPKGPDGRPGQPGSAG 179
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P GP P GP P G G G H P G+
Sbjct: 153 PAGPAGSAGPAGPKGPDGRPGQPGSAGHPGAPGQPGS 189
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASST 557
P GP G A SP GP P GP GP G P +G ST
Sbjct: 170 PAGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGEST 217
Score = 34.7 bits (76), Expect = 0.065
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 414 PLGPRAPRGPLAPV----SPLGPSMPG--GPCGPLGP 506
P GP P GP P SP PS PG GP GP GP
Sbjct: 161 PPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGP 197
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP 527
P P GP P P G G GP GP YP
Sbjct: 185 PPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYP 219
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 402 KSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
K+ P P P GP P P GP+ P GP G G
Sbjct: 146 KTPPPCKP-CPAGPPGPPGPDGPAGPAGPDGEAG 178
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 450 PVSPLGPSMPGGPCGPLGP 506
P P GP P GP GP GP
Sbjct: 155 PAGPPGPPGPDGPAGPAGP 173
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG--PSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P P G P+ G GP GP P +G
Sbjct: 225 GPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDG 266
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 414 PLGPRAPRGPLAP--VSPLGPSMPGGPCGPLGP 506
P GP P GP P SP GP GP GP
Sbjct: 226 PAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGP 258
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSH 515
P GP P GP P G + GP GP G ++
Sbjct: 185 PPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTY 218
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 441 PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P P P GP P GP GP G P G
Sbjct: 155 PAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPG 187
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 420 GPRAPRGPLA---PVSPLGPSMPGGPCGPLGP 506
GP P G P +P GP+ P GP GP GP
Sbjct: 208 GPDGPAGESTYPEPAAP-GPAGPPGPAGPPGP 238
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP+ +GPL P P GP P G G GP
Sbjct: 148 PPGPQGNKGPLGPPGPPGPEGPNGTAGNKGP 178
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHR--QYPPSNG 539
P GP P GP PLGP P GP GP G ++ PP G
Sbjct: 142 PPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPG 185
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
++ PLGP P GP P G P GP GP G P NG
Sbjct: 154 NKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENG 198
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P GP P GP P GP GP GP
Sbjct: 139 PEGPPGPAGPPGPQGNKGPLGPPGPPGPEGP 169
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPG---GPCGPLGPRSHRQYP 527
P GP P G P GP PG GP GP G P
Sbjct: 163 PPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEP 203
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +3
Query: 426 RAPRGPLAPVSPLG----PSMPGGPCGPLGPRSHR 518
R P+ P P++P P P GP GP GP+ ++
Sbjct: 121 RPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNK 155
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G +GP P P G P GP G G R+ P S G
Sbjct: 169 PNGTAGNKGPAGPPGPGGKPGPAGPPGENG-RNGEPQPGSPG 209
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAV----ASSTLYA*LPSP 581
P GP P G S GP P GP GP G P +G A T A P P
Sbjct: 216 PPGPPGPNGEAGAGSGPGPEGPAGPPGPNGKDGEAGAPGKDGDAGADGAPGTDAAYCPCP 275
Query: 582 PSSFSIG 602
P S ++G
Sbjct: 276 PRSAALG 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P P G + G G GP P G
Sbjct: 144 GPPGPEGPAGPAGPAGNAGADGEAGAEGPAGEAGPPGPPG 183
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLG 503
+ P G P P GP+ P GP G G
Sbjct: 137 KCPAGEPGPPGPEGPAGPAGPAGNAG 162
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P GP P G G GP G
Sbjct: 145 PPGPEGPAGPAGPAGNAGADGEAGAEGPAG 174
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P GP P G G P G GP GP P + G+
Sbjct: 151 PAGPAGPAGNAGADGEAGAEGPAGEAGPPGPPGPDGKPGAAGS 193
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P G P GP P P GP+ G G G
Sbjct: 139 PAGEPGPPGPEGPAGPAGPAGNAGADGEAG 168
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASST 557
P GP G A SP GP P GP GP G P +G ST
Sbjct: 171 PAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGEST 218
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 414 PLGPRAPRGPLAPV----SPLGPSMPG--GPCGPLGP 506
P GP P GP P SP PS PG GP GP GP
Sbjct: 162 PPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGP 198
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P P GP P P G G GP GP YP G
Sbjct: 186 PPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAG 224
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 402 KSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
K+ P P P GP P P GP+ P GP G G
Sbjct: 147 KTPPPCQP-CPAGPPGPPGPDGPAGPAGPDGEAG 179
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 450 PVSPLGPSMPGGPCGPLGP 506
P P GP P GP GP GP
Sbjct: 156 PAGPPGPPGPDGPAGPAGP 174
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG--PSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P P G P+ G GP GP P +G
Sbjct: 226 GPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDG 267
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 414 PLGPRAPRGPLAP--VSPLGPSMPGGPCGPLGP 506
P GP P GP P SP GP GP GP
Sbjct: 227 PAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGP 259
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSH 515
P GP P GP P G + GP GP G ++
Sbjct: 186 PPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTY 219
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 441 PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P P P GP P GP GP G P G
Sbjct: 156 PAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPG 188
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPG--GPCGPLGP 506
GP P G P GP G GP GP GP
Sbjct: 209 GPDGPAGESTYPEPAGPGPAGPPGPAGPPGP 239
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P G GGP GP GP P S+G
Sbjct: 237 PAGPPGPAGPAGPDGQSGSGSAGGP-GPKGPPGPAGQPGSDG 277
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLA-PVSPLGPSMPGGPCGPLGP 506
P GP P GP P P GP G P GP GP
Sbjct: 166 PAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGP 197
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASST 557
+P GP P P P GP+ P GP GP G P G +S+
Sbjct: 181 EPGGPGPAGSPAGPSGP-GPAGPPGPAGPPGNDGQPGQPGGPGQDGASS 228
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P+ P GP P P GP+ P G G G R + +P + GA
Sbjct: 148 PQGPAGPAGPSGPAGPAGPDGQPGFPGQRGNDGFPGAPGA 187
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 390 IRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGP--CGPLGPRSHRQYPPSNGA 542
+R IK+ P+G P GP P G + G P GPLGP P ++GA
Sbjct: 218 LRFIKTPGPVGAAGPPGPPGPPGSPGENTEGAPGLDGPLGPPGKPGTPGTDGA 270
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P GP P+ P G P GP G LG
Sbjct: 142 PAGPPGPPGPPGPLGPRGDKGPSGPRGALG 171
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
PLGPR +GP P LG GP G +G
Sbjct: 154 PLGPRGDKGPSGPRGALGDQGETGPVGEIG 183
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
+ P GP P P GP P G GP GPR
Sbjct: 140 KCPAGPPGPPGPPGPLGPRGDKGPSGPR 167
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P GPL P GPS P G G G
Sbjct: 145 PPGPPGPPGPLGPRGDKGPSGPRGALGDQG 174
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 459 PLGPSMPGGPCGPLGPRSHRQYPPSNGAV 545
P GP P GP GPLGPR + GA+
Sbjct: 142 PAGPPGPPGPPGPLGPRGDKGPSGPRGAL 170
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP PRG P P G G GP+G + P S G
Sbjct: 151 PPGPLGPRGDKGPSGPRGALGDQGETGPVGEIGDQGPPGSAG 192
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +3
Query: 408 RDPLGPR---APRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP 527
+ P GPR +G PV +G P G G GPR P
Sbjct: 161 KGPSGPRGALGDQGETGPVGEIGDQGPPGSAGRAGPRGQAGQP 203
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 35.5 bits (78), Expect = 0.037
Identities = 24/78 (30%), Positives = 28/78 (35%)
Frame = +3
Query: 351 ASMFCMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
A+ FC C + P GP P G P G P GP GP GP+
Sbjct: 137 AADFCFDCPVGPA-GPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDG 195
Query: 531 SNGAVASSTLYA*LPSPP 584
G + LPSPP
Sbjct: 196 GAGNPGTPGQVRSLPSPP 213
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPG-----GPCGPLGPRSHRQYPPSNG 539
P GP+ RGPL P P G ++ GP GP GP+ + P +G
Sbjct: 184 PPGPKGERGPLGPYGPPGDTVVAGVGIKGPLGPPGPQGMKGPPGPSG 230
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = +3
Query: 390 IRSIKSRDPLGPRAPRGPLAPVSPLG-----PSMPGGPCGPLG 503
+ + + PLGP P+G P P G P PG P G +G
Sbjct: 205 VAGVGIKGPLGPPGPQGMKGPPGPSGKGSNQPGQPGQP-GDIG 246
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAP------VSPLGPSMPGGPCGPLGP 506
++ PLGP P GP P P GP PGG GP GP
Sbjct: 156 NKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGP 195
Score = 35.1 bits (77), Expect = 0.049
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P GP P GP P GP GP GP
Sbjct: 141 PEGPPGPAGPPGPDGNKGPLGPPGPPGPEGP 171
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHR--QYPPSNG 539
P GP P GP PLGP P GP GP G ++ PP G
Sbjct: 144 PPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPG 187
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P P GP P P G P GP GP GP P + G
Sbjct: 141 PEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKG 179
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+ P GP P P GP+ P GP G G + P S+G
Sbjct: 146 KCPEGPAGPAGPEGPAGPAGPDGQPGAPGNAGNPGSDG 183
Score = 34.7 bits (76), Expect = 0.065
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 375 LTSASIRSIKSRDPLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGPRSHRQ--YPPSNG 539
LT A + + P GP P GP P P GP PG P P S Q P NG
Sbjct: 135 LTCAPVSQDCVKCPEGPAGPAGPEGPAGPAGPDGQPGAPGNAGNPGSDGQPGAPGDNG 192
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+ P GP P P GP+ P GP G G + P S+G
Sbjct: 158 KCPEGPAGPAGPEGPAGPAGPDGQPGAPGNAGNPGSDG 195
Score = 34.7 bits (76), Expect = 0.065
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 375 LTSASIRSIKSRDPLGPRAPRGPLAPVSPLGP-SMPGGPCGPLGPRSHRQ--YPPSNG 539
LT A + + P GP P GP P P GP PG P P S Q P NG
Sbjct: 147 LTCAPVSQDCVKCPEGPAGPAGPEGPAGPAGPDGQPGAPGNAGNPGSDGQPGAPGDNG 204
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 35.1 bits (77), Expect = 0.049
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPS--PP 584
DP G GP P P G GGP GP P + PPS G PS PP
Sbjct: 171 DPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNP---SEAPPSGGPTGPFDPSGAPPSGGPP 227
Query: 585 SSFS 596
F+
Sbjct: 228 GPFN 231
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G + GP P +P G GGP GP P PPS G
Sbjct: 306 DPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGG 345
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P P G GGP GP P PPS G
Sbjct: 291 DPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSG---APPSGG 330
Score = 34.3 bits (75), Expect = 0.086
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P +P G GGP GP P PPS G
Sbjct: 396 DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG---APPSGG 435
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P +P G GGP GP P PPS G
Sbjct: 216 DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGG 255
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P +P G GGP GP P PPS G
Sbjct: 246 DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGG 285
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P +P G GGP GP P PPS G
Sbjct: 336 DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGG 375
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P P G GGP GP P PPS G
Sbjct: 381 DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG---APPSGG 420
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P P G GGP GP P PPS G
Sbjct: 366 DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG---APPSGG 405
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
DP G GP P G GGP GP GP PPS G
Sbjct: 156 DPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSG---APPSGG 195
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P +P G GGP GP P PPS G
Sbjct: 411 NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG---APPSGG 450
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P +P G GGP GP P PPS G
Sbjct: 426 NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG---APPSGG 465
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P +P G GGP GP P PPS G
Sbjct: 441 NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG---APPSGG 480
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P P G GGP GP P PPS G
Sbjct: 231 NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG---APPSGG 270
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P P G GGP GP P PPS G
Sbjct: 321 NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG---APPSGG 360
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P +P G GGP GP P PPS G
Sbjct: 456 NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGG 495
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P P G GGP GP P PPS G
Sbjct: 471 NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSG---APPSGG 510
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/61 (34%), Positives = 23/61 (37%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPSS 590
DP G GP P +P G GGP GP P PPS +PS S
Sbjct: 486 DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG---APPSGMPPVPLPTDLPIPSESPS 542
Query: 591 F 593
F
Sbjct: 543 F 543
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P P G GGP GP P PPS G
Sbjct: 261 NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG---APPSGG 300
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+P G GP P P G GGP GP P PPS G
Sbjct: 351 NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG---APPSGG 390
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
DP G GP P P G GGP GP P
Sbjct: 276 DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 438 GPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P P G GGP GP P PPS G
Sbjct: 210 GPTGPFDPSGAPPSGGPPGPFNPSG---APPSGG 240
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCG-PLGPRSHRQYPP 530
P APR P P GPS GP G P GP H PP
Sbjct: 61 PPAPRPSGQPPGPQGPSDLPGPSGAPPGP-PHPSGPP 96
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPP 584
GP +GP P + G P GP GP GP P G+ A S +P PP
Sbjct: 156 GPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSE--PAVPGPP 208
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P G + P+GP A GP P GP GP G
Sbjct: 157 PPGEQGPKGPDAAPGEPGPKGPIGPPGPPG 186
>Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical
protein M7.10 protein.
Length = 220
Score = 34.7 bits (76), Expect = 0.065
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 396 SIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASST 557
S RDP GP R P P P GP P G P GP+ + ++G+ +S+
Sbjct: 165 SSPKRDPKGPGGLRRPKGPKGPKGPGGPHGK-PPGGPKKVSEEKEASGSAQASS 217
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP P GPL P P GP+ P GP P P + PS+
Sbjct: 1267 GPNGPNGPLDPNKP-GPNGPNGPSDPNKPGPNGPNGPSD 1304
Score = 34.3 bits (75), Expect = 0.086
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPC-----GPLGPR--SHRQYPPSNGAVASSTLYA*LPS 578
GP P GP P P GP+ P GP GP GP S P NG SS P+
Sbjct: 1323 GPNGPNGPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPN 1381
Query: 579 PPSSFSI 599
PS+ S+
Sbjct: 1382 GPSNPSV 1388
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP P GP P P GP+ P GP P P + PS+
Sbjct: 1281 GPNGPNGPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1318
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +3
Query: 414 PLGPRAPR--GPLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNGAVASST 557
P GP P GP P P P+ PG GP G P PSN +V S+
Sbjct: 1341 PNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPNGPSNPSVPESS 1392
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPS 587
P P GP P P GPS P GP P P + P + + + P+ PS
Sbjct: 965 PNGPNGPSDPNKP-GPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNGPS 1018
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
P P GP P P GP+ P GP P P + PS+
Sbjct: 1044 PNGPNGPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1080
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 402 KSRDPL--GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
+S DP GP P P P P GP+ P GP P P + PS+
Sbjct: 1175 ESSDPNKPGPNGPNEPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1220
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP P P P P GP+ P GP P P + PS+
Sbjct: 1071 GPNGPNEPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1108
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP P P P P GP+ P GP P P + PS+
Sbjct: 1099 GPNGPNEPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1136
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP GP P P GP+ P GP P P + PS+
Sbjct: 1225 GPNGSNGPSDPNKP-GPNGPNGPSDPNKPGPNGPNEPSD 1262
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
GP P P P P GP+ P GP P P + PS+
Sbjct: 1127 GPNGPNEPSDPNKP-GPNGPNGPSDPNKPGPNGPNGPSD 1164
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +3
Query: 360 FCMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
FC C + S P GP+ PRG P P + GP GP GP PP N
Sbjct: 198 FCFDCPPARS----GPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPG----PPGN 248
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Frame = +3
Query: 399 IKSRDPLGPRAPRGPLAPVSPLGPSMPGG-----PCGPLGPRSHRQYP 527
I ++D G P GP P P+G P G G +GP +R P
Sbjct: 263 IMTQDSRGVEGPSGPSGPPGPMGFPGPKGIDGFSQVGSMGPPGNRGAP 310
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 354 SMFCMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
S+F T + + S +P PR PRGP P G G GP G +H+ + P
Sbjct: 78 SVFRQKRQTFSGLPSWCQCEPAKPRCPRGPPGPPGRPGQRGTSGSPGPRGQDNHQVHAP 136
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+GP AP P PG P GP GP + P ++G
Sbjct: 220 PAGPAGPQGPPGAPGQPGHDGQPGAP-GPKGPNGNPGAPGADG 261
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +3
Query: 411 DPLGPRAPRGPL--APVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
+P P AP P AP P+ P PG GP GP GP P +G
Sbjct: 194 NPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDG 240
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+GP AP P PG P GP GP + P ++G
Sbjct: 220 PAGPAGPQGPPGAPGQPGHDGQPGAP-GPKGPNGNPGAPGADG 261
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +3
Query: 411 DPLGPRAPRGPL--APVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
+P P AP P AP P+ P PG GP GP GP P +G
Sbjct: 194 NPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDG 240
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P G PRGP V P GPS G GP GP
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGP 176
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPSS 590
GP PRG P P P PG GP G GP + + P N + A P PP +
Sbjct: 199 GPAGPRGEPGTEYKPGQPGRPGPPGPRGEAGP-AGQPGSPGNDGESGKPGNAGRPGPPGA 257
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P G PRGP V P GPS G GP GP
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGP 176
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/57 (38%), Positives = 24/57 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPP 584
P G PRGP V P GP+ G GP GP + P G A A P PP
Sbjct: 139 PPGRPGPRGPSGLVGPAGPAGDQGRHGPPGPTGGQGGPGEQGD-AGRPGAAGRPGPP 194
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/57 (38%), Positives = 24/57 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPP 584
P G PRGP V P GP+ G GP GP + P G A A P PP
Sbjct: 139 PPGCPGPRGPSGLVGPAGPAGDQGRHGPPGPTGGQGGPGEQGD-AGRPGAAGCPGPP 194
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+GP AP P PG P GP GP + P ++G
Sbjct: 220 PAGPAGPQGPPGAPGQPGHDGQPGAP-GPKGPNGNPGAPGADG 261
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +3
Query: 411 DPLGPRAPRGPL--APVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
+P P AP P AP P+ P PG GP GP GP P +G
Sbjct: 194 NPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDG 240
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+GP AP P PG P GP GP + P ++G
Sbjct: 220 PAGPAGPQGPPGAPGQPGHDGQPGAP-GPKGPNGNPGAPGADG 261
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +3
Query: 411 DPLGPRAPRGPL--APVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
+P P AP P AP P+ P PG GP GP GP P +G
Sbjct: 194 NPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDG 240
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P GP AP +P GP PG P G GP P S+G
Sbjct: 231 GPQGPPGPSGAPGAPGGPGYPGPP-GQKGPSGAPGQPGSDG 270
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P P GP P GP+ P G G G R + +P + GA
Sbjct: 164 PAGPAGPAGSSGPAGPAGPSGQPGTPGQRGNDGFPGAPGA 203
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGA 542
P P GP P GP+ P G G G R + +P + GA
Sbjct: 148 PAGPAGPAGSSGPAGPAGPSGQPGTPGQRGNDGFPGAPGA 187
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+G P AP P PG P GP GP + P ++G
Sbjct: 220 PAGPAGPQGQPGAPGQPGHDGQPGAP-GPKGPNGNPGAPGADG 261
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
GP P G + P P GP GP GP GP
Sbjct: 240 GPPGPIGEMGPPGPPGPRGEPGPPGPFGP 268
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GPR P+GP P GP P G GP GP R P G
Sbjct: 219 PPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPG 264
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG-PRSH 515
P+G P GP P GP P GP G G P H
Sbjct: 244 PIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGGH 278
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP----SMPGGPC 491
P GP PRG P P GP PGG C
Sbjct: 250 PPGPPGPRGEPGPPGPFGPPGDSGEPGGHC 279
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
GP P G + P P GP GP GP GP
Sbjct: 240 GPPGPIGEMGPPGPPGPRGEPGPPGPFGP 268
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +3
Query: 414 PLGPRAPRGPLA----PVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GPR P+GP P GP P G GP GP R P G
Sbjct: 219 PPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPG 264
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG-PRSH 515
P+G P GP P GP P GP G G P H
Sbjct: 244 PIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGGH 278
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGP----SMPGGPC 491
P GP PRG P P GP PGG C
Sbjct: 250 PPGPPGPRGEPGPPGPFGPPGDSGEPGGHC 279
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 ASMFCMSCLTSASIRSIKSRDPLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPR 509
A+ FC C T K GP+ P G P AP +P G ++PG P GP GP+
Sbjct: 179 AADFCFDCPTGPPGPPGKQ----GPKGPNGEPGAPGTPGGNALPGPP-GPPGPQ 227
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAV 545
G P GP P P+GP PG P P + Q PP + +
Sbjct: 253 GTPGPAGPPGPPGPIGP--PGQPGAPGSSQPGPQGPPGDPGI 292
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
+P P P + GP+ P GP GP+GP P S+
Sbjct: 238 NPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSS 279
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P GP +P +P GP PG P G GP P ++G
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQPGAP-GQKGPSGAPGQPGADG 265
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P GP +P +P GP G P GP GP P ++G
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAP-GPKGPSGAPGQPGADG 265
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P GP +P +P GP G P GP GP P ++G
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAP-GPKGPSGAPGQPGADG 265
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P GP +P +P GP G P GP GP P ++G
Sbjct: 226 GPQGPPGPAGSPGAPGGPGQAGAP-GPKGPSGAPGQPGADG 265
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G R P+G PV G + P G GP GP+ P G
Sbjct: 244 PKGQRGPQGEQGPVGDNGRNGPVGGAGPAGPQGGSGGPGEKG 285
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
GP+ RGP P+G + GP G GP
Sbjct: 243 GPKGQRGPQGEQGPVGDNGRNGPVGGAGP 271
>AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen
protein 46 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPS-MPG--GPCGPLGPRSHRQYP--PSNGAVASS 554
GP P G P GPS MPG GP G GPR + P P N A +
Sbjct: 215 GPAGPIGEEGEFGPPGPSGMPGIDGPIGAQGPRGKKGKPGFPGNDGAAGA 264
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 459 PLGPSMPGGPCG--PLGPRSHRQYPPSNGAVASSTLYA*LPSPPS 587
P GPS P GP G P GP+ H +P + G+ + TL + PPS
Sbjct: 79 PSGPSGPSGPHGGFPGGPQGH--FPGNTGSSNTPTLPGVIGVPPS 121
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 435 RGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAV 545
RG PV P+GP GP GP G R P G V
Sbjct: 91 RGKPGPVGPVGPPGKSGPAGPQGRRGLMGIPGHPGPV 127
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLG 503
R GP+ PV P G S P GP G G
Sbjct: 91 RGKPGPVGPVGPPGKSGPAGPQGRRG 116
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG-PSMPGGPCGPLGP 506
P+GP GP P G +PG P GP+GP
Sbjct: 99 PVGPPGKSGPAGPQGRRGLMGIPGHP-GPVGP 129
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP+ P G AP +P GP PG P G GP P +NG
Sbjct: 210 GPQGPPGSSGAPGAPGGPGFPGAP-GSKGPSGAPGQPGANG 249
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P GP P GP PGGP P GP
Sbjct: 115 PGGPGTPGGPGNPGGLGGPGNPGGPGTPGGP 145
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P GP +P GP PGGP P G
Sbjct: 100 PGGPGNPGGPGGLGTPGGPGTPGGPGNPGG 129
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P G P +P GP PGGP P G
Sbjct: 121 PGGPGNPGGLGGPGNPGGPGTPGGPGTPGG 150
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 411 DPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
+P GP P P +P GP PGG GP P
Sbjct: 105 NPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNP 136
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 435 RGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAV 545
RG PV P+GP GP GP G R P G V
Sbjct: 91 RGKPGPVGPVGPPGKSGPAGPQGRRGLMGIPGHPGPV 127
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLG 503
R GP+ PV P G S P GP G G
Sbjct: 91 RGKPGPVGPVGPPGKSGPAGPQGRRG 116
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG-PSMPGGPCGPLGP 506
P+GP GP P G +PG P GP+GP
Sbjct: 99 PVGPPGKSGPAGPQGRRGLMGIPGHP-GPVGP 129
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P+GP AP P PG P GP GP + P ++G
Sbjct: 225 PAGPPGPQGPPGAPGQPGHDGQPGTP-GPKGPNGNPGAPGADG 266
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +3
Query: 426 RAPRGPLAPVSPLG----PSMPGGPCGPLGPRSHRQYPPSNGAVAS 551
R P+ P P++P P P GP GP GP S GA S
Sbjct: 136 RPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGS 181
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P AP G S+PG P GP GP P SNG
Sbjct: 186 GQKGPSGAPGAPGQSGGASLPGPP-GPAGPPGPSGQPGSNG 225
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSP--LGPSMPGGPCGPLG 503
P GP P GP AP P G + PGGP GP G
Sbjct: 245 PAGPPGPPGPAGAPGQPGQSGSAQPGGP-GPQG 276
>U28739-1|AAK68186.2| 339|Caenorhabditis elegans Hypothetical
protein C17G10.3 protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = -2
Query: 325 PERFNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSVESPVEISSRGRTGEIRHDSTTDW 146
P+ +L KA R+++ + RD ++ + PSV E SSR + IR ++
Sbjct: 46 PKPSDLSKAERKEKNNKTARRDVKSSRGNVKTMKPSVVKAEERSSRSKK-SIREGKLKNF 104
Query: 145 SMVKGDNDLEDLPLGLMDDMKALERLRQYHV 53
S+ K ++++ L L D K+ + +Y +
Sbjct: 105 SLPKDESEITALQLD-ADLTKSARLMEEYKI 134
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 399 IKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPS 578
I S+ + P + R PL P S PS+ P P + P G +++T+ A +P
Sbjct: 274 IASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPF 333
Query: 579 PP 584
P
Sbjct: 334 HP 335
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 399 IKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPS 578
I S+ + P + R PL P S PS+ P P + P G +++T+ A +P
Sbjct: 276 IASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPF 335
Query: 579 PP 584
P
Sbjct: 336 HP 337
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
S P GP+ G PV GP P GP GP G
Sbjct: 249 SEGPQGPQGDAGRPGPVGEQGPQGPEGPQGPPG 281
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
GP+ P+G P+G P GP GP GP
Sbjct: 251 GPQGPQGDAGRPGPVGEQGPQGPEGPQGP 279
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Frame = +3
Query: 414 PLGPRAPRGPL--------APVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA* 569
P GP P GP +P GP P G G GP P ++GA Y
Sbjct: 240 PAGPPGPAGPAGEDAYAQPSPAGTPGPPGPPGKDGEAGPDGPAGAPGTDGAPGPDAAYC- 298
Query: 570 LPSPPSSFSIG 602
P PP + G
Sbjct: 299 -PCPPRTLGAG 308
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP-PSNGAVASSTLYA*LPSPP 584
P GP GP + P GP GP GP P P A T P PP
Sbjct: 181 PAGPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPP 238
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P P G + P GP G GP
Sbjct: 166 PAGPPGPPGPDGNAGPAGPAGAAGP 190
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCG 494
P GP P GP P GP+ GP G
Sbjct: 166 PAGPPGPPGPDGNAGPAGPAGAAGPDG 192
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P P GP P GP+ P G GP G
Sbjct: 166 PAGPPGPPGPDGNAGPAGPAGAAGPDG 192
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 459 PLGPSMPGGPCGPLGPRSHRQYPPS 533
P GP+ P GP GP G ++ Q P+
Sbjct: 237 PPGPAGPPGPAGPAGEDAYAQPSPA 261
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -2
Query: 280 QEKIDRDSRTEQELEAYTAPSVESPVEISSRG--RTGEIRHDSTTDWSMVKGDNDLEDLP 107
++ ++R+ R +L+ VE ++I+ +G RHD + + K +++L +
Sbjct: 1044 EDSLEREKRARADLDKQKR-KVEGELKIAQENIDESGRQRHDLENN--LKKKESELHSVS 1100
Query: 106 LGLMDDMKALERLRQYHVTGNSSKIDDEEETEND 5
L D+ + +L++ G S + EEE EN+
Sbjct: 1101 SRLEDEQALVSKLQRQIKDGQSRISELEEELENE 1134
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -2
Query: 280 QEKIDRDSRTEQELEAYTAPSVESPVEISSRG--RTGEIRHDSTTDWSMVKGDNDLEDLP 107
++ ++R+ R +L+ VE ++I+ +G RHD + + K +++L +
Sbjct: 1044 EDSLEREKRARADLDKQKR-KVEGELKIAQENIDESGRQRHDLENN--LKKKESELHSVS 1100
Query: 106 LGLMDDMKALERLRQYHVTGNSSKIDDEEETEND 5
L D+ + +L++ G S + EEE EN+
Sbjct: 1101 SRLEDEQALVSKLQRQIKDGQSRISELEEELENE 1134
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = -2
Query: 280 QEKIDRDSRTEQELEAYTAPSVESPVEISSRG--RTGEIRHDSTTDWSMVKGDNDLEDLP 107
++ ++R+ R +L+ VE ++I+ +G RHD + + K +++L +
Sbjct: 1047 EDSLEREKRARADLDKQKR-KVEGELKIAQENIDESGRQRHDLENN--LKKKESELHSVS 1103
Query: 106 LGLMDDMKALERLRQYHVTGNSSKIDDEEETEND 5
L D+ + +L++ G S + EEE EN+
Sbjct: 1104 SRLEDEQALVSKLQRQIKDGQSRISELEEELENE 1137
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
S P GP P GP A P P GP GP GP
Sbjct: 184 SPGPAGPPGPAGP-AGEDAAAPESPPGPPGPPGP 216
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSM--PGGPCGPLGPRSHRQYPPSNG 539
GP P G P A GP P GP GP GP P NG
Sbjct: 127 GPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNG 169
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = +3
Query: 414 PLGPRAPRG-----PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPS 578
P GP P G P +P P GP P G G G P ++GA Y P
Sbjct: 190 PPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGGPGTDGAPGVDAAYC--PC 247
Query: 579 PP 584
PP
Sbjct: 248 PP 249
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 12/54 (22%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPS-MPG-----------GPCGPLGPRSHRQYPPSNG 539
P GP P GP P GPS PG GP GP GP P + G
Sbjct: 113 PAGPPGPPGPDGNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPG 166
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 441 PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
PL P GP GP GP GP YP +G
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSG 291
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGG 485
PLG PRGP P GP P G
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTG 282
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P+G P P G GP GP GP
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLY 563
P GP+ GP P G S P GP GP G + P A+ +
Sbjct: 241 PPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKYCALDGGVFF 290
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P GP G GP GP P G
Sbjct: 237 GPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 411 DPLGPRAPRGP--LAPVSPLGP-SMPG--GPCGPLGPR 509
+PL P AP P P P GP PG GP GP GP+
Sbjct: 208 EPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 245
>U00025-2|ABA54414.1| 418|Caenorhabditis elegans Amp-activated
kinase protein 1,isoform b protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 363 CMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMP 479
C S S S+ KS+ L + + P++P+SP+ P P
Sbjct: 309 CRSRAASVSVTLAKSKSDLNGNSSKVPMSPLSPMSPISP 347
>U00025-1|ABA54413.1| 589|Caenorhabditis elegans Amp-activated
kinase protein 1,isoform a protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 363 CMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMP 479
C S S S+ KS+ L + + P++P+SP+ P P
Sbjct: 480 CRSRAASVSVTLAKSKSDLNGNSSKVPMSPLSPMSPISP 518
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 441 PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
PL P GP GP GP GP YP +G
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSG 291
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGG 485
PLG PRGP P GP P G
Sbjct: 259 PLGRPGPRGPPGEAGPEGPQGPTG 282
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P+G P P G GP GP GP
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLY 563
P GP+ GP P G S P GP GP G + P A+ +
Sbjct: 241 PPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKYCALDGGVFF 290
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P GP G GP GP P G
Sbjct: 237 GPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 411 DPLGPRAPRGP--LAPVSPLGP-SMPG--GPCGPLGPR 509
+PL P AP P P P GP PG GP GP GP+
Sbjct: 208 EPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 245
>AY347272-1|AAR06927.1| 589|Caenorhabditis elegans AMP-activated
protein kinase alphasubunit 2 protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 363 CMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMP 479
C S S S+ KS+ L + + P++P+SP+ P P
Sbjct: 480 CRSRAASVSVTLAKSKSDLNGNSSKVPMSPLSPMSPISP 518
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGPSMPGG---PCGPLGPRSHRQYPPSNGAVASSTLYA*LP 575
S P P P P P +P GP PGG P GP G P ++G A T Y +
Sbjct: 30 SGGPGTPGGPGTPGGPGTPGGPGTPGGLGTPGGP-GTPGGPGTPETSGGTAGGTYYVIIV 88
Query: 576 SPPSSFSIGCS 608
+ C+
Sbjct: 89 QNGQRVIVNCA 99
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 426 RAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVAS 551
R P P PV+P P P P GP G YP ++G S
Sbjct: 203 RPPEAPCEPVTP--PPCPPCPAGPKGAPGQAGYPGADGQPGS 242
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = -2
Query: 382 DVRHDIQNIEARVYKDGEKPERFNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSVESPV 203
D+R I N+E ++G +R L++ +R + ++ +D D E+ E +
Sbjct: 42 DLRRKIGNLEHVAEENGRTIDR--LEQEVQRAKAEKSVDFDEEKEKTEEKEVEKEEKEVA 99
Query: 202 EISSRGRTGEIRH 164
+ RG GE+ H
Sbjct: 100 PVPVRGNRGEMAH 112
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = -2
Query: 382 DVRHDIQNIEARVYKDGEKPERFNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSVESPV 203
D+R I N+E ++G +R L++ +R + ++ +D D E+ E +
Sbjct: 40 DLRRKIGNLEHVAEENGRTIDR--LEQEVQRAKAEKSVDFDEEKEKTEEKEVEKEEKEVA 97
Query: 202 EISSRGRTGEIRH 164
+ RG GE+ H
Sbjct: 98 PVPVRGNRGEMAH 110
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P+G P P G GP GP GP
Sbjct: 243 PPGPPGPKGAPGPDGPPGVDGQSGPPGPPGP 273
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLY 563
P GP+ GP P G S P GP GP G + P A+ +
Sbjct: 246 PPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKGICPKYCALDGGVFF 295
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P GP G GP GP P G
Sbjct: 242 GPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKG 281
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 411 DPLGPRAPRGP--LAPVSPLGP-SMPG--GPCGPLGPR 509
+PL P AP P P P GP PG GP GP GP+
Sbjct: 213 EPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPK 250
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P AP G ++PG P GP GP P SNG
Sbjct: 185 GQKGPSGAPGAPGQSGGAALPGPP-GPAGPPGPAGQPGSNG 224
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P AP G ++PG P GP GP P SNG
Sbjct: 185 GQKGPSGAPGAPGQSGGAALPGPP-GPAGPPGPAGQPGSNG 224
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P AP G ++PG P GP GP P SNG
Sbjct: 185 GQKGPSGAPGAPGQSGGAALPGPP-GPAGPPGPAGQPGSNG 224
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P AP G ++PG P GP GP P SNG
Sbjct: 185 GQKGPSGAPGAPGQSGGAALPGPP-GPAGPPGPAGQPGSNG 224
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P GP+ G GP GP P G
Sbjct: 244 GPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKG 283
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 411 DPLGPRAP--RGPLAPVSPLGP-SMPG--GPCGPLGPR 509
+PL P AP G P P GP PG GP GP GP+
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPK 252
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
GP+ G A PL P PG G GP GP P ++G
Sbjct: 203 GPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDG 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P+G P P G GP GP G
Sbjct: 245 PPGPPGPKGSPGPDGPAGVDGQAGPPGPPG 274
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P G P GP P G GP GP
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGPDGP 260
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP P GP P GP+ G GP GP P G
Sbjct: 244 GPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKG 283
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Frame = +3
Query: 411 DPLGPRAP--RGPLAPVSPLGP-SMPG--GPCGPLGPR 509
+PL P AP G P P GP PG GP GP GP+
Sbjct: 215 EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPK 252
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
GP+ G A PL P PG G GP GP P ++G
Sbjct: 203 GPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDG 244
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P+G P P G GP GP G
Sbjct: 245 PPGPPGPKGSPGPDGPAGVDGQAGPPGPPG 274
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P G P GP P G GP GP
Sbjct: 230 PAGPPGPPGAPGNDGPPGPPGPKGSPGPDGP 260
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.5 bits (58), Expect(2) = 1.0
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG--PRSH 515
P G GP P GP PGGP GP G P+SH
Sbjct: 472 PPGHGGMGGP--PPGQGGPGGPGGPGGPGGMLPKSH 505
Score = 21.8 bits (44), Expect(2) = 1.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 492 GPLGPRSHRQYPPSNG 539
GP G + R YPP G
Sbjct: 526 GPPGGTAGRDYPPQQG 541
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
G + P G P P G S+PG P GP GP P SNG
Sbjct: 182 GQKGPSGAPGVPGQTGGASLPGPP-GPAGPPGPSGQPGSNG 221
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSP--LGPSMPGGPCGPLG 503
P GP P GP AP P G PGGP GP G
Sbjct: 241 PAGPPGPPGPAGAPGQPGQSGSGQPGGP-GPQG 272
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 408 RDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
+DP + P GP P P GP+ P G G G
Sbjct: 140 KDPSCVKCPEGPAGPPGPEGPAGPAGSDGQPG 171
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 9/40 (22%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG----PSMPG-----GPCGPLGP 506
P GP P GP P P G P PG GP GP GP
Sbjct: 148 PEGPAGPPGPEGPAGPAGSDGQPGAPGDAGKDGPPGPPGP 187
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+ P P GP+ P GP GP GP P + G
Sbjct: 139 PKDPSCVKCPEGPAGPPGPEGPAGPAGSDGQPGAPG 174
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P+ P P P GP P GP GP G
Sbjct: 139 PKDPSCVKCPEGPAGPPGPEGPAGPAG 165
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P P + P P P GP P GP G G
Sbjct: 139 PKDPSCVKCPEGPAGPPGPEGPAGPAGSDG 168
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVAS 551
G AP PL P P GP P GP G GP P G S
Sbjct: 210 GDDAPSEPLIPGEP-GPQGPPGPPGQAGPDGQPGAPGGPGTPGS 252
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGP-SMPGGPCGPLGPRSHRQYPPSN 536
G P+GP P GP PG P GP P S + PP N
Sbjct: 221 GEPGPQGPPGPPGQAGPDGQPGAPGGPGTPGS--KGPPGN 258
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPP 584
GP PRG P P P PG GP G GP + P ++G A A P PP
Sbjct: 198 GPAGPRGEPGTEYKPGQPGRPGPQGPRGETGPAGNPGAPGNDGE-AGKNGNAGRPGPP 254
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPP 584
GP PRG P P P PG GP G GP + P ++G A A P PP
Sbjct: 192 GPAGPRGEPGTEYKPGQPGRPGPQGPRGETGPAGNPGAPGNDGE-AGKNGNAGRPGPP 248
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
P GP P G PV P G G CGP G
Sbjct: 140 PAGPAGPPGQQGPVGPQGFPGVVGTCGPSG 169
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
P+GP+ G + P G GP GPLG +
Sbjct: 152 PVGPQGFPGVVGTCGPSGDDGQPGPAGPLGDK 183
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Frame = +3
Query: 414 PLGPRAPRGPLAP------VSPLGPSMPGGPCGPLGP 506
P GP +GP+ P V GPS G GP GP
Sbjct: 143 PAGPPGQQGPVGPQGFPGVVGTCGPSGDDGQPGPAGP 179
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.5 bits (58), Expect(2) = 1.1
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG--PRSH 515
P G GP P GP PGGP GP G P+SH
Sbjct: 192 PPGHGGMGGP--PPGQGGPGGPGGPGGPGGMLPKSH 225
Score = 21.8 bits (44), Expect(2) = 1.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 492 GPLGPRSHRQYPPSNG 539
GP G + R YPP G
Sbjct: 246 GPPGGTAGRDYPPQQG 261
>Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical
protein F31C3.6a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -2
Query: 394 LMLADVRHDIQNIEARVYKDGEKPERFNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSV 215
+++ DV ++I +EA V + + + R ++K R+SR E E + TAP
Sbjct: 384 VIIEDVENEIDYVEA-VEGPVDIASSATPESSPRSEQKSVDSGRESRDESEEDEETAPGT 442
Query: 214 ESPVEISS 191
E EIS+
Sbjct: 443 EGQKEIST 450
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GP P GP P P GP G G GP
Sbjct: 223 PPGPPGPPGPPGPQGPPGPPGKDGQPGKAGP 253
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
GP G + +P GP P GP GP GP
Sbjct: 210 GPTGEPGKVINGAPPGPPGPPGPPGPQGP 238
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 393 RSIKSRDPLGPRAPRGPLAPVSPLGPSMPG--GPCGPLGP 506
R + + +GP A GP++ + +G +PG GP GP GP
Sbjct: 149 RGVMTGPYVGPHAGPGPMSHHTNMGNVLPGPPGPPGPPGP 188
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSN 536
P+G R P G GP G GP+GP Q PP N
Sbjct: 514 PMGLRGPHGTEGETGKQGPEGSKGYPGPMGP----QGPPGN 550
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 9/51 (17%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG-PSMPG--------GPCGPLGPRSHRQYPPSNG 539
P GP P G P G P PG GP GP GP P SNG
Sbjct: 172 PAGPPGPSGAPGQKGPSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNG 222
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = -2
Query: 292 RQRKQEKIDRDSRTEQELEAYTAPSVESPVEISSRGRTGEIRHDSTTDWSMVKG-DNDLE 116
R QEKI D TE+ T P+ +S + S+ T E + +G L
Sbjct: 131 RYDPQEKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDDEGLPAKLN 190
Query: 115 DLPLGLMDDMKALERLRQYHVTGNSSKIDDEE 20
LP +A+ERL+ + +SS ++++
Sbjct: 191 KLPNNFFRMSRAIERLKAMAGSHDSSMTEEDK 222
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG------PSMPGGPCGPLGPRSHRQYPPSNG 539
G P GP A +P P+ P GP GP GP+ P S+G
Sbjct: 135 GNDGPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGNPGSDG 180
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 441 PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P P P GP+ P GP G G P +NG
Sbjct: 157 PAGPPGPAGPAGPKGPNGNPGSDGQPGAPGNNG 189
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLG-PSMPGGPCGP 497
P GP P GP P P G P G P P
Sbjct: 157 PAGPPGPAGPAGPKGPNGNPGSDGQPGAP 185
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = -2
Query: 292 RQRKQEKIDRDSRTEQELEAYTAPSVESPVEISSRGRTGEIRHDSTTDWSMVKG-DNDLE 116
R QEKI D TE+ T P+ +S + S+ T E + +G L
Sbjct: 131 RYDPQEKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDDEGLPAKLN 190
Query: 115 DLPLGLMDDMKALERLRQYHVTGNSSKIDDEE 20
LP +A+ERL+ + +SS ++++
Sbjct: 191 KLPNNFFRMSRAIERLKAMAGSHDSSMTEEDK 222
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = -2
Query: 292 RQRKQEKIDRDSRTEQELEAYTAPSVESPVEISSRGRTGEIRHDSTTDWSMVKG-DNDLE 116
R QEKI D TE+ T P+ +S + S+ T E + +G L
Sbjct: 131 RYDPQEKIYEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDDEGLPAKLN 190
Query: 115 DLPLGLMDDMKALERLRQYHVTGNSSKIDDEE 20
LP +A+ERL+ + +SS ++++
Sbjct: 191 KLPNNFFRMSRAIERLKAMAGSHDSSMTEEDK 222
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = +3
Query: 351 ASMFCMSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
AS FC C + P GP P G G P GP GP GP + P
Sbjct: 168 ASDFCFDCPPGPA-GPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGN---PG 223
Query: 531 SNGA 542
++GA
Sbjct: 224 TDGA 227
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
P GP P GP G + PG GP G GP P GA
Sbjct: 243 PPGPAGPPGPAGNAGQAGYAQPGPAGPPGDAGPDGAPGNPGQPGA 287
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPG-----GPCGPLGPRSHRQYPPSNG 539
P GP GP P +P GP PG G GP GP P ++G
Sbjct: 173 PAGPAGNAGP--PGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDG 217
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GPR +GP P G P G G +GP
Sbjct: 241 PKGPRGDQGPTGPAGQNGLHGPPGEPGTVGP 271
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +3
Query: 402 KSRD---PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
K RD P+G P+GP P GP+ G GP G
Sbjct: 228 KGRDAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPG 264
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG-------PSMPG--GPCGPLGPRSHRQYP 527
GP+ PRG P P G P PG GP GP G + RQ P
Sbjct: 240 GPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEGPSG-KQGRQGP 283
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+GP P GP V P +PG P P G R + P +G
Sbjct: 1426 PVGPPGPSGPQNLVEPGEKGLPGLPGAP-GLRGEKGMPGLDG 1466
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+GP P GP V P +PG P P G R + P +G
Sbjct: 1425 PVGPPGPSGPQNLVEPGEKGLPGLPGAP-GLRGEKGMPGLDG 1465
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+GP P GP V P +PG P P G R + P +G
Sbjct: 1425 PVGPPGPSGPQNLVEPGEKGLPGLPGAP-GLRGEKGMPGLDG 1465
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+GP P GP V P +PG P P G R + P +G
Sbjct: 1426 PVGPPGPSGPQNLVEPGEKGLPGLPGAP-GLRGEKGMPGLDG 1466
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P+GP P GP V P +PG P P G R + P +G
Sbjct: 1462 PVGPPGPSGPQNLVEPGEKGLPGLPGAP-GLRGEKGMPGLDG 1502
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPSSF 593
P G A GP GP+ P GP G GP + + + G PPS
Sbjct: 101 PTGAGADIGPTCCPCQQGPAGPPGPAGDTGPNGNDGHHGAPGVPGKEGSILSSALPPSEP 160
Query: 594 SIGC 605
I C
Sbjct: 161 CIIC 164
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 384 ASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP 527
A + I + P G GP+ P GP P GP G G H P
Sbjct: 254 AGLTEIGGQGPPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEP 301
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPSSF 593
P G A GP GP+ P GP G GP + + + G PPS
Sbjct: 101 PTGAGADIGPTCCPCQQGPAGPPGPAGDTGPNGNDGHHGAPGVPGKEGSILSSALPPSEP 160
Query: 594 SIGC 605
I C
Sbjct: 161 CIIC 164
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 384 ASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP 527
A + I + P G GP+ P GP P GP G G H P
Sbjct: 254 AGLTEIGGQGPPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEP 301
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGP 506
P GPR +GP P G P G G +GP
Sbjct: 241 PKGPRGDQGPTGPAGQNGLHGPPGEPGTVGP 271
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +3
Query: 402 KSRD---PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
K RD P+G P+GP P GP+ G GP G
Sbjct: 228 KGRDAEHPIGGPGPKGPRGDQGPTGPAGQNGLHGPPG 264
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLG-------PSMPG--GPCGPLGPRSHRQYP 527
GP+ PRG P P G P PG GP GP G + RQ P
Sbjct: 240 GPKGPRGDQGPTGPAGQNGLHGPPGEPGTVGPEGPSG-KQGRQGP 283
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVAS 551
G + P G P AP G ++PG P GP G P SNG V +
Sbjct: 220 GQKGPSGAPGAPGQSGGSALPG-PPGPAGSPGRSGQPGSNGNVGA 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSP--LGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP AP P G S+PG P GP G P + G
Sbjct: 279 PAGPPGPPGPSGAPGHPGQAGSSLPGAP-GPQGDAGAPGQPGAPG 322
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 366 MSCLTSASIRSIKSRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+S T+A++ ++ + P P P + P P G GGP P + H QYPP +G
Sbjct: 40 ISTETAAAVAALVRKPP--PSLPPSTMPP-GPHGMPFMGGP--PPHHQYHLQYPPPHG 92
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 408 RDPLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
R P GPR P G +P P P PG P G G RS R P ++G
Sbjct: 166 RGPPGPRGPAGDAGSPGQPGHPGSPGNP-GRGGQRS-RGTPGASG 208
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 FCMSCLTSASIRSIKSRDPLGPRAPRG-PLAPVSP--LGPSMPGGPCGPLGPRSHRQYPP 530
FC++C A + P GP+ G P AP GP P GP G G +P
Sbjct: 130 FCITCPAGAPGPAGPPGAP-GPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPG 188
Query: 531 SNG 539
S G
Sbjct: 189 SPG 191
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 420 GPRAPRGPLA-PVSPLGPSMPGGPCGPLGPRSHRQYPP 530
GP P GP P GP PGGP GP + Y P
Sbjct: 275 GPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCP 312
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP G + PG P GP GP + P G
Sbjct: 253 PAGPPGPPGPPGQDGSGGAAQPGPP-GPPGPPGNDGQPGGPG 293
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P P G + P G G GP PP G
Sbjct: 179 PAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPG 214
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP+ P GP LG GG GP GPR
Sbjct: 151 GPKGPPGPPGGPGELGGPGRGGNRGPPGPR 180
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
G R P GP P GP GG G G PP
Sbjct: 172 GNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPP 208
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPR 509
GP+ P GP LG GG GP GPR
Sbjct: 151 GPKGPPGPPGGPGELGGPGRGGNRGPPGPR 180
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
G R P GP P GP GG G G PP
Sbjct: 172 GNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPP 208
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP +PV P+ PGG P+ PR PP G
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPG 794
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP +PV P+ PGG P+ PR PP G
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPG 794
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -2
Query: 325 PERFNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSVESPVEISSRGRTGEIRHDSTTDW 146
P+ +L KA R+++ + RD ++ + PSV E SSR + IR ++
Sbjct: 38 PKPSDLSKAERKEKNNKTARRDVKSSRGNVKTMKPSVVKVEERSSRSKK-SIREGKLKNF 96
Query: 145 SMVKGDNDLEDLPL 104
S+ K + ++ L L
Sbjct: 97 SLPKDEPEITALQL 110
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Frame = +3
Query: 405 SRDPLGPRA---PRGPLAPVSPLGPSM---PG---GPCGPLGPRSHRQ-----YPPSNGA 542
S P+GP A G P +P P M PG GP GP+ P S + YPP G
Sbjct: 1235 SHHPMGPPAYPGTPGSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPPQMGM 1294
Query: 543 VAS 551
+ S
Sbjct: 1295 INS 1297
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Frame = +3
Query: 405 SRDPLGPRA---PRGPLAPVSPLGPSM---PG---GPCGPLGPRSHRQ-----YPPSNGA 542
S P+GP A G P +P P M PG GP GP+ P S + YPP G
Sbjct: 1235 SHHPMGPPAYPGTPGSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPPQMGM 1294
Query: 543 VAS 551
+ S
Sbjct: 1295 INS 1297
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 139 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 176
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 230 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 273
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 234 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 275
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 201 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 238
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 292 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 335
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 296 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 337
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 220 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 261
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 138 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 175
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 229 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 272
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 233 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 274
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 157 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 198
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 138 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 175
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 229 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 272
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 233 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 274
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 157 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 198
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 139 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 176
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 230 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 273
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 234 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 275
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +3
Query: 420 GPRAPRGPLAPVS------PLGPSMPGGPCGPLGPRSH 515
GP P AP P GP P GP GP GP +
Sbjct: 139 GPDGPAATPAPAHEFCFDCPAGPPGPAGPAGPKGPNGN 176
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 420 GPRAPRGPLAPV-SPLGPSMPG--GPCGPLGPRSHRQYPPSNGA 542
G P GP P SP P PG GP GP G P GA
Sbjct: 230 GAPGPDGPAGPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQPGA 273
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRG-PLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P G P AP +P G P GP G G P +NG
Sbjct: 234 PDGPAGPAGSPGAPGNP-GSQGPQGPAGDNGGAGSPGQPGANG 275
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP P GP P P G S G G G + P + G
Sbjct: 158 PAGPPGPAGPAGPKGPNGNSGSDGQPGAPGNNGNAGGPGAPG 199
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP +PV P+ PGG P+ PR PP G
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPG 794
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 432 PRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GP +PV P+ PGG P+ PR PP G
Sbjct: 760 PSGP-SPVPRPAPAPPGGRQAPMPPRGGPGAPPPPG 794
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPS-MPGGPCGP 497
P+ P+GP V P GPS +PG P P
Sbjct: 185 PQGPQGPPGAVGPCGPSGIPGLPGNP 210
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RDPLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPS 533
R P GPR P G +P P P PG P G G RS PS
Sbjct: 166 RGPPGPRGPAGDAGSPGQPGHPGSPGNP-GRGGQRSRGLPGPS 207
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +3
Query: 360 FCMSCLTSASIRSIKSRDPLGPRAPRG-PLAPVSP--LGPSMPGGPCGPLGPRSHRQYPP 530
FC++C A + P GP+ G P AP GP P GP G G +P
Sbjct: 130 FCITCPAGAPGPAGPPGAP-GPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPG 188
Query: 531 SNG 539
S G
Sbjct: 189 SPG 191
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
Frame = +3
Query: 405 SRDPLGPRA---PRGPLAPVSPLGPSM---PG---GPCGPLGPRSHRQ-----YPPSNGA 542
S P+GP A G P +P P M PG GP GP+ P S + YPP G
Sbjct: 1235 SHHPMGPPAYPGTPGSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPPQMGM 1294
Query: 543 VAS 551
+ S
Sbjct: 1295 INS 1297
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LP---SPP 584
P G GP+ GP G GP GP P +G V Y P +P
Sbjct: 237 PEGDAGNDGPVGAAGAPGPDGINGFQGPGGPPGEEGKPGEDGKVGDDAAYCPCPDRNAPK 296
Query: 585 SSFSIGCSNN 614
+++ S+N
Sbjct: 297 ENYASAPSHN 306
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPLA-PVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP P P PG P GP GP + P ++G
Sbjct: 220 PQGAPGPQGPPGQPGQPGHDGQPGAP-GPKGPNGNPGQPGADG 261
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPLA-PVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP P P PG P GP GP + P ++G
Sbjct: 187 PQGTPGPQGPPGQPGQPGHDGQPGAP-GPKGPNGNPGQPGADG 228
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPLA-PVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP P P PG P GP GP + P ++G
Sbjct: 220 PQGTPGPQGPPGQPGQPGHDGQPGAP-GPKGPNGNPGQPGADG 261
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +3
Query: 402 KSRDPLGPRAPRGPL----APVSPLGPSMPG--GPCGPLGPRSHRQYPPSNG 539
+SR GP GP AP P S PG GP GP GP +P +G
Sbjct: 199 RSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPPGPNGQPGHPGQDG 250
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPS 533
S+ P GPR P G +G G G G RSH PS
Sbjct: 166 SQGPAGPRGPAGDAGAPGQVGAPGNPGQAGRGGQRSHGLPGPS 208
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 124 DLEDLPL-GLMDDMKALERLRQYHVTGNSSKIDDEEETE 11
D +LP+ +DD+K L+ LRQY +S K+D +E
Sbjct: 3 DTRELPVFAYIDDVKQLQELRQYLNKHDSVKLDPNGPSE 41
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 420 GPRAPRG-PLAPVSPLGPSMPGGPCGPLG 503
GP+ P G P AP P G PG P GP G
Sbjct: 138 GPKGPNGNPGAPAQPGGQGPPG-PPGPAG 165
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 607 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 521
+H L+ D G GNY+ ++DA A G Y
Sbjct: 700 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 728
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 607 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 521
+H L+ D G GNY+ ++DA A G Y
Sbjct: 715 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 743
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 607 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 521
+H L+ D G GNY+ ++DA A G Y
Sbjct: 16526 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 16554
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 607 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 521
+H L+ D G GNY+ ++DA A G Y
Sbjct: 16541 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 16569
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHR 518
P GP P+G L G P GP G G + R
Sbjct: 314 PAGPAGPQGNLGGPGVFGEKGPQGPVGAPGQKGRR 348
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
PLGP P GP + G GP GP+G
Sbjct: 311 PLGPAGPAGPQGNLGGPGVFGEKGPQGPVG 340
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +3
Query: 405 SRDPLGPRAPRGPLAPVSPLGP-SMPGGP--CGPLGPRSHRQYPPSNG 539
++ P P P+GPL P P GP GGP G GP+ P G
Sbjct: 300 TKPPCVP-CPQGPLGPAGPAGPQGNLGGPGVFGEKGPQGPVGAPGQKG 346
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P GPR P G LG GP GP G R P G
Sbjct: 153 PKGPRGPAGIEGKPGRLGEDNRPGPPGPPGVRGEPGSPGEKG 194
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLG 503
GP RG + +P GP+ P G GP G
Sbjct: 194 GPTGDRGKVLNGAPPGPTGPPGKVGPRG 221
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAP-RGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G +P RG P+ GP M GGP GP R PP G
Sbjct: 1471 PRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPG 1513
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSP-LGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSP 581
P P P P AP+ G + P G GP+G S+ Q P G Y P P
Sbjct: 60 PALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGP 116
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSP-LGPSMPGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSP 581
P P P P AP+ G + P G GP+G S+ Q P G Y P P
Sbjct: 60 PALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGP 116
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 450 PVSPLGPSM--PGGPCGPLGPRSHRQYPPSNGAVASSTLYA*LPSPPSSFSIG 602
P S L P PGGP GP+S + + P + ST P S+F+ G
Sbjct: 197 PGSVLAPGSIPPGGPASQTGPQSIQVFGPGSVQPPGSTQAPSSVQPASTFNPG 249
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 420 GPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
GP PRG P G S G P GP GP+ P G
Sbjct: 224 GPAGPRGAPGPAGHPGSSGGGRP-GPAGPKGAPGQPGRPG 262
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYP 527
P P G + P+ P+G G G GPR + +P
Sbjct: 150 PPGPVGAIGPMGPIGSMGRAGQPGYSGPRGNDGFP 184
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RDPLGPR-APRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPS 533
RD L R RG P P G GP G LGP+ PS
Sbjct: 160 RDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPS 202
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RDPLGPR-APRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPS 533
RD L R RG P P G GP G LGP+ PS
Sbjct: 213 RDGLAGRPGARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPS 255
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPP 530
P GP+ + P+GP P G GP G +S+ Q PP
Sbjct: 187 PTGAPGPMGAIGPIGPPGPKGNPGPDG-QSY-QGPP 220
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCG 494
P G P G + P+ P GP GP G
Sbjct: 187 PTGAPGPMGAIGPIGPPGPKGNPGPDG 213
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 414 PLGPRAPRGPLAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVAS 551
P+GP P GP P G PG P GP G ++ P G V +
Sbjct: 141 PVGPPGPPGPKGPDGESG--APGEP-GPAGRPGNKGAPGPAGPVGA 183
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 444 LAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+ P GP GP GP GP+ PP +G
Sbjct: 185 ICPTGAPGPMGAMGPKGPPGPKGSPGEPPQDG 216
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 444 LAPVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
+ P GP GP GP GP+ PP +G
Sbjct: 185 ICPTGAPGPMGAMGPKGPPGPKGSPGEPPQDG 216
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 431 APRSSRSSITFGSLHARRSLWSPRSSLASTIP 526
+PR++ SSIT G + RRS SP IP
Sbjct: 103 SPRNTTSSITTGLVKKRRSSSSPEDICREKIP 134
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 423 PRAPRGPLAPVSPLGPSMPGGPCGPLGPRSH 515
P AP P + +P GP+ P GP GP G H
Sbjct: 218 PGAPGQPGSGNAP-GPAGPPGPAGPNGQPGH 247
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP AP P + PG P GP GP P G
Sbjct: 208 PSGAPGPQGPPGAPGQPGSGNAPG-PAGPPGPAGPNGQPGHPG 249
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP +P P PG P GP GP P ++G
Sbjct: 220 PPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQPGADG 261
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -2
Query: 382 DVRHDIQNIEARVYKDGEKPERFNLQ--KAWRRQRKQEKIDRDSRTEQELEAYTAPSVES 209
D + D++ I+ ++ KP+ ++ WRR+ E+++ E+E+EA APS E+
Sbjct: 808 DFQVDLKRIDFDKHRSRLKPKMRLMRWIPRWRRRGTDEEVEEVD--EEEVEADYAPS-ET 864
Query: 208 PVEISSRGRTGEIRHD 161
S R +T D
Sbjct: 865 DTTRSDRPKTKSFTED 880
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP +P P PG P GP GP P ++G
Sbjct: 219 PPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQPGADG 260
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 414 PLGPRAPRGPL-APVSPLGPSMPGGPCGPLGPRSHRQYPPSNG 539
P G P+GP +P P PG P GP GP P ++G
Sbjct: 220 PPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQPGADG 261
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 402 KSRDPLGPRAPRG-PLAP-VSPLGPSMPGGPCGPLGPRSHRQYPPSNGAVASST 557
+SRDP GPR PRG + P P G P P +H + P + G+ +++
Sbjct: 457 ESRDPYGPREPRGYDIEPKYEPRGIPPRSAPI-RAPPAAHGRAPDTWGSYGAAS 509
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 370 DIQNIEARVYKDGEKPER--FNLQKAWRRQRKQEKIDRDSRTEQELEAYTAPSVESPVEI 197
DI+ + K G+K +R F L + RRQ K K +R + E+ +E Y E +I
Sbjct: 641 DIEKARQEI-KSGDKEDRKRFKLLREQRRQEKLAKKNRRAEEEEAVE-YDEDGSEDEPDI 698
Query: 196 S 194
S
Sbjct: 699 S 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,029,123
Number of Sequences: 27780
Number of extensions: 322313
Number of successful extensions: 3125
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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