Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n16r
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 99 2e-21
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 93 3e-19
01_06_0824 - 32243495-32244319,32244449-32244859 88 6e-18
11_02_0012 - 7346282-7347136,7347234-7347593 86 2e-17
11_02_0011 - 7337618-7338496,7338596-7338991 61 4e-16
05_06_0044 - 25150322-25151260 80 2e-15
11_01_0750 - 6315126-6315896,6316371-6316784 75 5e-14
04_04_0619 + 26652923-26653267,26653440-26654273 73 2e-13
11_01_0767 + 6438648-6438809,6439146-6440000 71 8e-13
01_01_1152 + 9170628-9171899 69 3e-12
11_01_0771 + 6453130-6454488 66 2e-11
04_04_0620 + 26656072-26656417,26656585-26657396 47 1e-05
11_02_0014 - 7352619-7352918,7353173-7353418 37 0.020
09_03_0056 - 11936264-11939677 31 0.74
03_02_0930 - 12480983-12481888 31 0.98
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 30 2.3
12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949,323... 29 4.0
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 4.0
01_05_0618 + 23723441-23723465,23724733-23724788,23725108-237253... 29 4.0
12_01_0917 + 9010666-9011022 29 5.2
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 29 5.2
12_01_0404 + 3200787-3200898,3201016-3201091,3201442-3201544,320... 28 6.9
12_01_0786 - 7181513-7181635,7181898-7182047,7184699-7184778,718... 28 9.2
02_05_1133 + 34346894-34347121,34347222-34347283,34347373-343474... 28 9.2
02_05_0203 + 26717246-26717354,26718797-26719575 28 9.2
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 99 bits (238), Expect = 2e-21
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W ++ T G IK + +D T + + N ++F+G W F+AS+T++ +FH+ + +++
Sbjct: 220 WVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQ 279
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKEPG----FRMVVVLPDKIDGLPAVLEKA-AEK 386
P M + + + L K+++LPY++ G F M ++LP+ DGL ++ EK +E
Sbjct: 280 APFMSTSKKQYILSYDNL--KVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEP 337
Query: 385 GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAP-----GIVKND 221
LE + ++PKF+I G + + +L +G+ F A +
Sbjct: 338 EFLEKHIPTRQVTVG-QFKLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGK 396
Query: 220 QVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFLILHE-- 47
+ VS F ++FV+V+EEG A A T + F DHPFLFLI +
Sbjct: 397 NLFVSSVFHKSFVEVNEEGTEAAAATAAVIT----LRSAPIAEDFVADHPFLFLIQEDMT 452
Query: 46 DKILFAG 26
+LF G
Sbjct: 453 GVVLFVG 459
Score = 99 bits (238), Expect = 2e-21
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W D T G IK + I+ T + + N ++F+G W F+ S+TE+ +FH+ + +++
Sbjct: 472 WVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQ 531
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKEPG----FRMVVVLPDKIDGLPAVLEKA-AEK 386
P M + + + + L K+++LPY + G F M ++LP+ DGL ++ EK +E
Sbjct: 532 APFMSTRKKQYLSSYDSL--KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEP 589
Query: 385 GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVKND----- 221
+E+ + P + ++PKF+I G + +L +G+ +F I D
Sbjct: 590 EFMENHIPMRPVHVG-QFKLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPGAQ 648
Query: 220 QVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFLILHE-- 47
+ VS F ++F++V+EEG A A AV F DHPF+FLI +
Sbjct: 649 NLFVSSVFHKSFIEVNEEGTEATA-----AVMVSMEHSRPRRLNFVADHPFMFLIREDVT 703
Query: 46 DKILFAG 26
ILF G
Sbjct: 704 GVILFIG 710
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 92.7 bits (220), Expect = 3e-19
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W D T G IK + +D T + + N ++F+G W F+AS+T++ +F + + ++
Sbjct: 12 WVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVL 71
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKE----PGFRMVVVLPDKIDGLPAVLEKA-AEK 386
P M + + + + L K+++LPY++ F M ++LP+ DGL ++ K +E
Sbjct: 72 APFMSTSKKQYLSSYDSL--KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEP 129
Query: 385 GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAP-----GIVKND 221
LE + ++PKF+I G + + +L +G+ F A G +
Sbjct: 130 EFLEKRIPTRQVTVG-KFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERH 188
Query: 220 QVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFLILHE-- 47
+ VS F ++FV+VDEEG A A + + F DHPFLFLI +
Sbjct: 189 NLFVSSLFHKSFVQVDEEGTEAAAASAAVV----SFRSAPVTVDFVADHPFLFLIREDMT 244
Query: 46 DKILFAG 26
+LF G
Sbjct: 245 GVVLFIG 251
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 88.2 bits (209), Expect = 6e-18
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 22/261 (8%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W + T G IK + +D +D AT + N ++F+G W F+A T + F++ + +
Sbjct: 148 WFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVS 207
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKEPG----------FRMVVVLPDKIDGLPAVLE 401
P M + + G K++ LPY G F M + LPD+ GLP +L
Sbjct: 208 APFMSSGKWQYIACRA--GYKVLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLR 265
Query: 400 KAAEK--GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVK 227
K L+E L+ +P+F + + L ++G+ F+ P + +
Sbjct: 266 KLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSE 325
Query: 226 N-------DQVVVSRAFQEAFVKVDEEGATAGAFTGLI-AVPTXXXXXXXXXXPFKVDHP 71
+++VVS + E+FV+V+EEG A A T ++ + F DHP
Sbjct: 326 MVESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHP 385
Query: 70 FLFLILHE--DKILFAGTHTH 14
F+FLI + ++FAG T+
Sbjct: 386 FMFLIKEDLTGVVVFAGQVTN 406
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 86.2 bits (204), Expect = 2e-17
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W + T I+ + + + TA+ + N I+F+G W PF T FH + +++
Sbjct: 131 WVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVD 190
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPY----------------------KEPGFRMVVVL 437
P M + + + G K+++LPY + G M + L
Sbjct: 191 APFMSSREDQYIGFYD--GFKVLKLPYHRTMKNHGDGGDITPAILKHYGENVGLSMYIFL 248
Query: 436 PDKIDGLPAVLEK--AAEKGLLEDVF--NLSPAGRDI---ELEIPKFEIRSGLDLNIILP 278
PD DGLPA+++K A G F + P R I +L +P+F++ ++N +L
Sbjct: 249 PDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLK 308
Query: 277 KVGVSKIF---QEPAPGIVKNDQVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXX 107
+G+ F + G++ + VVV + A V+V+EEG A A T
Sbjct: 309 GMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATA--CTMKFLCLT 366
Query: 106 XXXXXPFKVDHPFLFLILHE--DKILFAG 26
F DHPF F ++ E D +LFAG
Sbjct: 367 LTSPVDFVADHPFAFFVVEEKSDAVLFAG 395
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 61.3 bits (142), Expect(2) = 4e-16
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Frame = -1
Query: 460 GFRMVVVLPDKIDGLPAVLEK-AAEKGLLEDVFNLSPA-GRDI-ELEIPKFEIRSGLDLN 290
G M + LPD+ DGLPA+++K AA + + P R++ +L +P+F++ +N
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQIN 320
Query: 289 IILPKVGVSKIF---QEPAPGIVKN-DQ----VVVSRAFQEAFVKVDEEGATAGAFTGLI 134
+L +GV+ F + G+ + DQ +VV F A V+V+EEG A A T
Sbjct: 321 GVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTAC- 379
Query: 133 AVPTXXXXXXXXXXPFKVDHPFLFLILHEDK--ILFAG 26
T F DHPF F ++ E +LFAG
Sbjct: 380 ---TIRLLSMSYPEDFVADHPFAFFVVEETSGAVLFAG 414
Score = 41.1 bits (92), Expect(2) = 4e-16
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W + T I + + + TA+ + N I+F+G W PF S T FH + +++
Sbjct: 143 WVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVD 202
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPY 470
P M + + ++ G +++LPY
Sbjct: 203 VPFMSSREDQYIGFHD--GFTVLKLPY 227
>05_06_0044 - 25150322-25151260
Length = 312
Score = 79.8 bits (188), Expect = 2e-15
Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Frame = -1
Query: 667 ATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPTMR-LLQSLFYTENEELGA 491
+ +V + N ++F +W PF TEE DFHV ++ P M Q F G
Sbjct: 75 SASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGF 134
Query: 490 KMIELPYKEPG-------FRMVVVLPDKIDGLPAVLEKAAEKG---LLEDVFNLSPAGRD 341
++ + Y+ G F M + LPD DGLP + K A L + P
Sbjct: 135 NVLRMMYRTGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVG 194
Query: 340 IELEIPKFEIRSGLDLNIILPKVGVSKIFQEPA----PGIVKN--DQVVVSRAFQEAFVK 179
EL+IPKFE+ ++ + +L + G+ F A G++ + VS + FV
Sbjct: 195 -ELKIPKFEVSLKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVN 253
Query: 178 VDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFLILHE--DKILFAGTHTH*KL 5
V+EEG A A G + F DHPFLF I+ E ++FAG + L
Sbjct: 254 VNEEGTVAAA--GTVGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQVVNPLL 311
Query: 4 H 2
H
Sbjct: 312 H 312
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 75.4 bits (177), Expect = 5e-14
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 13/248 (5%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W + T+G + T + ID T + + + ++F+G W + T E+ F+ + T+++
Sbjct: 149 WVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVE 208
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYK----EPGFRMVVVLPDKIDGLPAVLEKA-AEK 386
P + ++ + ++ K+I+LPYK E F M + LPD DGL + +K +E
Sbjct: 209 VPFVEYDRTRLFAVHDNF--KVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEP 266
Query: 385 GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNIILPKVGVSKIFQEPA--PGIVKNDQ-- 218
LE +L + + +P F+I +D+ L +G+ F A ++K D
Sbjct: 267 MFLEQ--HLPTEKCHVGISVPNFKISFQIDVKDFLKDMGLELPFLREAEFSDMIKEDDSS 324
Query: 217 --VVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFLILHE- 47
+ +S +A ++VD++G + + + P FK DHPF F+I E
Sbjct: 325 GPLFLSDVLHKAVLEVDQKGIEETSVSMGLGKP-------LPAQHFKADHPFFFMIREEV 377
Query: 46 -DKILFAG 26
++F G
Sbjct: 378 SGTVIFMG 385
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 73.3 bits (172), Expect = 2e-13
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 25/257 (9%)
Frame = -1
Query: 721 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIKKPT 542
+ T G + +S +T + N + F+ W F + +T+ + FH + T + P
Sbjct: 129 QATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPF 188
Query: 541 MRLLQSLFYTENEELGAKMIELPYK-----------EPGFRMVVVLPDKIDGLPAVLEKA 395
+ ++ + + LG K+++L YK P F M+V LP K DGL +L A
Sbjct: 189 LSDPRTHYAARFDGLGFKVLQLFYKMVGHDGQVHFGAPCFCMLVFLPIKRDGLRHLLRMA 248
Query: 394 AEKGLLEDVFNLSPAGRD--IELEIPKFEIRSGLDLNIILPKVGVSKIFQEPAPGIVK-- 227
+ + V P +PKF+ S LD L K+G+ F A + +
Sbjct: 249 VTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELDARGALAKLGLGAPFDPLAADLSRMA 306
Query: 226 ------NDQVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPT--XXXXXXXXXXPFKVDHP 71
+++ VS Q+ V+VDEEG TA T PT F +HP
Sbjct: 307 VSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCSPTYSGPESPKPRPMSFVAEHP 366
Query: 70 FLFLILHEDK--ILFAG 26
F+F I+ +K +LF G
Sbjct: 367 FMFAIVEYEKAQVLFLG 383
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 71.3 bits (167), Expect = 8e-13
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 31/266 (11%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W T+ I + + T + N I+F+G W PF+ S+T E++F + ++++
Sbjct: 65 WVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVE 124
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKE-------------PGFRMVVVLPDKIDGLPA 410
P M+ ++ G +++ LPYK P F M+V LPD DGLP
Sbjct: 125 VPFMQRPSGSYHHVACHDGFRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPG 184
Query: 409 VLEKAAEKGLLEDVFNLSPAGRDI-ELEIPKFEIR-SGLDLNIILPKVGVS---KIFQEP 245
+L++ D +L P + +PKF++ + +L +G+ +F
Sbjct: 185 LLDRITASPEFVDE-HLPPGCVPVGRFRVPKFKLAFCHYGIADVLRGLGLRLPFDMFAAE 243
Query: 244 APGI-VKND----QVVVSRAFQEAFVKVDEEGATAGAFTGL------IAVPTXXXXXXXX 98
GI V+ D + VS + V+V+EEG+ A A+T ++
Sbjct: 244 MSGIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEAAAYTEESDDDLGCSLYDDDYTPPPK 303
Query: 97 XXPFKVDHPFLFLILHE--DKILFAG 26
F DHPF F I+ E I+FAG
Sbjct: 304 LVDFVADHPFAFFIVEERSQAIVFAG 329
>01_01_1152 + 9170628-9171899
Length = 423
Score = 69.3 bits (162), Expect = 3e-12
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 18/253 (7%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
+ + T+G I+ + + +D +T V + N + F+G W +PF+ S T FH+ + ++
Sbjct: 166 FVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVR 225
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPYKEPG------------FRMVVVLPDKIDGLPAV 407
P M G ++LPYK G F M+++LPD L
Sbjct: 226 APFMTTEIPFERHVAAFPGFTALKLPYKNVGGGGGGDGVPRAAFYMLLLLPDGDGALKLA 285
Query: 406 LEKAAEKGLLEDVFNLSPAGRD--IELEIPKFEIRSGLDLNIILPKVGVSKIFQ--EPAP 239
E + +PA L +PKF+ + + K+GV++ F + +
Sbjct: 286 DLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSG 345
Query: 238 GIVKNDQVVVSRAFQEAFVKVDEEGATAGAFTGLIAVPTXXXXXXXXXXPFKVDHPFLFL 59
+ D + ++ + +A ++VDE G A A T AV F D PFLF
Sbjct: 346 MVTGGDGLFIAEVYHQATIEVDELGTVAAAST---AVVMMQKGSSLPPVDFVADRPFLFA 402
Query: 58 ILHE--DKILFAG 26
++ E +LF G
Sbjct: 403 VVEELTGAVLFLG 415
>11_01_0771 + 6453130-6454488
Length = 452
Score = 66.5 bits (155), Expect = 2e-11
Identities = 71/276 (25%), Positives = 113/276 (40%), Gaps = 33/276 (11%)
Frame = -1
Query: 754 ECR*YHQPWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDF- 578
E R WA T I + + P TAV + N I+F+G W PFN S+TE K F
Sbjct: 172 EARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
Query: 577 -HVDEKTTIKKPTMRLLQSLFYTE-NEELGAKMIELPYKEP------------------- 461
H + + S Y G K+++L Y+ P
Sbjct: 232 RHDGAAAAAAVADVPYMSSRSYQRVAVHDGFKVLKLRYRSPRLLRDKRKRGGGGDVGGEF 291
Query: 460 -GFRMVVVLPDKIDGLPAVLEKAAEK-GLLEDVFNLSPAGRDIELEIPKFEIRSGLDLNI 287
+ M + LPD DGL ++E+ A + G L + + E +PKF++ G +
Sbjct: 292 TRYAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVG 351
Query: 286 ILPKVGVSKIFQEPAPGI---VKND----QVVVSRAFQEAFVKVDEEGATAGAFTGLIAV 128
L ++G+ F + V++D + V +A ++V+EEG A A T +
Sbjct: 352 ALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRML 411
Query: 127 PTXXXXXXXXXXPFKVDHPFLFLILHE--DKILFAG 26
P+ F +HPF + I+ E ++FAG
Sbjct: 412 PS---GVPPPPVDFVAEHPFAYFIVEEMSSAVVFAG 444
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 47.2 bits (107), Expect = 1e-05
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Frame = -1
Query: 484 IELPYKEPGFRMVVVLPDKIDGLPAVLEKAAEKGLLEDVFNLSPAGRDI--ELEIPKFEI 311
++ + P F M+V LP K DGL +L A + + V P R I ++PKF+
Sbjct: 212 VDFGFGAPCFCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKF 269
Query: 310 RSGLDLNIILPKVGVSKIFQEPAPGIVK---NDQ---VVVSRAFQEAFVKVDEEGATAGA 149
S LD L ++G+ F A + + N + VS Q+ V+VDEEG TA
Sbjct: 270 SSQLDAGGALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTAVE 329
Query: 148 FTGLIAVP---TXXXXXXXXXXPFKVDHPFLFLILHEDK--ILFAG 26
+ P F +HPF+F I+ K +LF G
Sbjct: 330 AMYSPSSPGYSPGYQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLG 375
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/87 (22%), Positives = 38/87 (43%)
Frame = -1
Query: 730 WADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDFHVDEKTTIK 551
W + T I + + + T + + N I+F+G W PF T FH + +++
Sbjct: 93 WVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVN 152
Query: 550 KPTMRLLQSLFYTENEELGAKMIELPY 470
MR + + + G +++LPY
Sbjct: 153 VRFMRSREDQYIGFYD--GFNVLKLPY 177
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 99 GGGLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM 236
GGG E G A++ APA A S T+ASW+ + T +F M
Sbjct: 24 GGGGGVEGAGAAVAA--APATARRSRKRTRASWRTVTTDPSNFRAM 67
>03_02_0930 - 12480983-12481888
Length = 301
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3
Query: 90 GRDGGGLDSEDVGTAISPVKAPAVAPSSST 179
G GGG DS + GT PV APA A SSS+
Sbjct: 180 GSSGGGHDSNNAGT---PVSAPAPASSSSS 206
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 96 DGGGLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM-PGAGSWNIFDTP 272
D G + P++ PAV PSSS ++ ++ + + T S + PG ++ +T
Sbjct: 189 DSVGETESSINEQRCPIREPAVTPSSSPESETAFGSTDVGTSSVSSSDPGTSPYSASETN 248
Query: 273 TLGKIILRSSPLRISNLGISNSMS 344
+ K + S++ +S+S S
Sbjct: 249 STFKKEATKDNFQHSDVNVSDSES 272
>12_01_0410 -
3234836-3234958,3235636-3235776,3235899-3235949,
3236045-3236125,3236427-3236483,3236898-3236993,
3237204-3237379,3237630-3237703,3237909-3238016,
3238100-3238236,3238396-3238446,3239032-3239142,
3239291-3239363,3240322-3240398,3240641-3240706,
3241349-3241463,3242255-3242511
Length = 597
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 90 GRDGGGLDSEDVGTAISPVKAPAVAPSSS 176
G GGG++ E VG + SP + PA AP++S
Sbjct: 8 GGGGGGVE-EGVGESSSPPRDPAAAPAAS 35
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 259 IFQEPAPGIVKNDQVVVSRAFQEAFVKVDEEGATAGAFTG 140
+F+ PAP I ++ AF+ A V D +GA A G
Sbjct: 20 LFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLG 59
>01_05_0618 +
23723441-23723465,23724733-23724788,23725108-23725372,
23725623-23725759,23725849-23725943,23726033-23727057,
23727293-23727453,23727816-23727892,23727978-23728125,
23728364-23728441,23728611-23728838
Length = 764
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 105 GLDSEDVGTAISPVKAPAVAPSSSTFTKASWKALETTTWSFLTM-PGAGSWNIFDTPTLG 281
G + DV + ++ PAV P+SS + ++++ E T S + PG ++ DT
Sbjct: 248 GKTTTDVKEPRTSIRGPAVTPNSSPDLETTFESTEAGTSSVSSSDPGTSPYSASDTNGSM 307
Query: 282 KIILRSSPLRISNLGISNSMS 344
K ++ R+ +L I+ S S
Sbjct: 308 KKEAPATKDRVQHLDINISDS 328
>12_01_0917 + 9010666-9011022
Length = 118
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 69 NGWSTLNGRDGGGLDSEDVGTA 134
NGW GR GGG+ +D G A
Sbjct: 46 NGWQRRRGRSGGGVRVDDDGNA 67
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -2
Query: 498 WVQR**SYRIRSQDSVWSWFCPTKLTDYLQCWRKLLKRVYLK 373
WV R+++ WS FCP + CW +++Y K
Sbjct: 364 WVPDLFMQRVQNNQE-WSLFCPNEAPGLADCWGDEFEKLYTK 404
>12_01_0404 +
3200787-3200898,3201016-3201091,3201442-3201544,
3202109-3202160,3202239-3202333,3202703-3202768,
3202910-3203419,3203598-3203756,3204022-3204321,
3204867-3205193,3205548-3205754,3205978-3206076,
3206193-3206251,3206294-3206639
Length = 836
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 472 TVTLSSLHPILRFQCKTKTVRDALSVS*WSFFH 570
T ++ L+ ILR CKTK D V W + +
Sbjct: 472 TTSIGQLNSILRQACKTKEKEDLRKVDNWQYIN 504
>12_01_0786 -
7181513-7181635,7181898-7182047,7184699-7184778,
7185710-7186098,7186499-7186628,7186793-7187183
Length = 420
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 WSTLNGRDGGGLDSEDVGTAISPVKAPAVAPSSSTF 182
WST G + +D E G + S APA+AP +
Sbjct: 81 WSTAFGNNCSKIDGEYGGASTSSSAAPALAPPQEDY 116
>02_05_1133 +
34346894-34347121,34347222-34347283,34347373-34347460,
34348005-34348268,34348346-34348586,34348672-34348748,
34348837-34349007,34349084-34349176,34349257-34349406,
34349491-34349577,34349656-34349820,34349900-34350019,
34350244-34350446,34350547-34350696,34350779-34350926,
34351046-34351129,34351207-34351308
Length = 810
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 474 RIRSQDSVWSWFCPTKLTDYLQCWRKLLKRVYLK 373
R+++ ++ WS FCP + CW + +Y K
Sbjct: 341 RVQNNEN-WSLFCPNEAPGLADCWGDEFQNLYKK 373
>02_05_0203 + 26717246-26717354,26718797-26719575
Length = 295
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 107 TATISTVQSRPSIPVPNSSRRQDTLCWDTHTLK 9
T T +++RP PN S + + W TLK
Sbjct: 138 TVTRKEMETRPKSVPPNQSNQAENAAWSVETLK 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,176,203
Number of Sequences: 37544
Number of extensions: 404397
Number of successful extensions: 1256
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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