Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n14f
(601 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021404-1|AAX33552.1| 411|Drosophila melanogaster LD11219p pro... 201 5e-52
AF152419-1|AAD38390.1| 411|Drosophila melanogaster WD-40 protei... 201 5e-52
AF117606-1|AAD13113.1| 411|Drosophila melanogaster lissencephal... 201 5e-52
AE013599-2210|AAS64845.1| 411|Drosophila melanogaster CG8440-PF... 201 5e-52
AE013599-2209|AAO41383.1| 411|Drosophila melanogaster CG8440-PE... 201 5e-52
AE013599-2208|AAO41382.1| 411|Drosophila melanogaster CG8440-PD... 201 5e-52
AE013599-2207|AAO41381.1| 411|Drosophila melanogaster CG8440-PC... 201 5e-52
AE013599-2206|AAO41380.1| 411|Drosophila melanogaster CG8440-PB... 201 5e-52
AE013599-2205|AAF58050.1| 411|Drosophila melanogaster CG8440-PA... 201 5e-52
AF098070-1|AAC83821.1| 409|Drosophila melanogaster Lis1 homolog... 197 8e-51
Z98269-5|CAB10973.1| 1741|Drosophila melanogaster EG:87B1.2,FBgn... 35 0.074
AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,... 35 0.074
AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,... 35 0.074
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 33 0.30
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 33 0.30
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 33 0.30
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 33 0.30
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 33 0.30
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 33 0.30
AY095034-1|AAM11362.1| 225|Drosophila melanogaster LD25271p pro... 31 1.6
AE014298-2748|AAF48867.1| 225|Drosophila melanogaster CG6617-PA... 31 1.6
AY129432-1|AAM76174.1| 744|Drosophila melanogaster GM04379p pro... 30 2.1
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 30 2.1
AY089639-1|AAL90377.1| 595|Drosophila melanogaster RE56519p pro... 30 2.1
AY070634-1|AAL48105.1| 237|Drosophila melanogaster RH01588p pro... 30 2.1
AE014297-2081|AAN13676.1| 744|Drosophila melanogaster CG17604-P... 30 2.1
AE014297-2080|AAN13675.1| 744|Drosophila melanogaster CG17604-P... 30 2.1
AE014297-2079|AAF55223.1| 744|Drosophila melanogaster CG17604-P... 30 2.1
AE013599-2465|AAF57866.2| 237|Drosophila melanogaster CG18467-P... 30 2.1
>BT021404-1|AAX33552.1| 411|Drosophila melanogaster LD11219p
protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AF152419-1|AAD38390.1| 411|Drosophila melanogaster WD-40 protein
LIS1 protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AF117606-1|AAD13113.1| 411|Drosophila melanogaster lissencephaly-1
protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2210|AAS64845.1| 411|Drosophila melanogaster CG8440-PF,
isoform F protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2209|AAO41383.1| 411|Drosophila melanogaster CG8440-PE,
isoform E protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2208|AAO41382.1| 411|Drosophila melanogaster CG8440-PD,
isoform D protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2207|AAO41381.1| 411|Drosophila melanogaster CG8440-PC,
isoform C protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2206|AAO41380.1| 411|Drosophila melanogaster CG8440-PB,
isoform B protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AE013599-2205|AAF58050.1| 411|Drosophila melanogaster CG8440-PA,
isoform A protein.
Length = 411
Score = 201 bits (491), Expect = 5e-52
Identities = 93/114 (81%), Positives = 107/114 (93%)
Frame = +3
Query: 258 MKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR 437
MKMVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIR
Sbjct: 1 MKMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIR 60
Query: 438 LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
LQKKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 LQKKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 114
>AF098070-1|AAC83821.1| 409|Drosophila melanogaster Lis1 homolog
protein.
Length = 409
Score = 197 bits (481), Expect = 8e-51
Identities = 91/112 (81%), Positives = 105/112 (93%)
Frame = +3
Query: 264 MVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIRLQ 443
MVLSQRQREELN+AIADYLGSNGY D+LE F+KEAD++ E+++KFGGLLEKKWTSVIRLQ
Sbjct: 1 MVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIRLQ 60
Query: 444 KKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFCLTGHRATITKV 599
KKVMELE+KL+EA+KE IEGAPT+ KRTP EWIPRPPEKF LTGHRA+IT+V
Sbjct: 61 KKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRV 112
>Z98269-5|CAB10973.1| 1741|Drosophila melanogaster
EG:87B1.2,FBgn0004655;wapl protein.
Length = 1741
Score = 35.1 bits (77), Expect = 0.074
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1
Query: 214 CSRVLLVHAGDGGNSVAIITQNTKNHLLLHYSLILFDLTHTVNALHTRLEAE 59
CSR +++H DGG S LL+ +L +LTHT N L AE
Sbjct: 1415 CSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAE 1466
>AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,
isoform B protein.
Length = 1092
Score = 35.1 bits (77), Expect = 0.074
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1
Query: 214 CSRVLLVHAGDGGNSVAIITQNTKNHLLLHYSLILFDLTHTVNALHTRLEAE 59
CSR +++H DGG S LL+ +L +LTHT N L AE
Sbjct: 766 CSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAE 817
>AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,
isoform A protein.
Length = 1741
Score = 35.1 bits (77), Expect = 0.074
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1
Query: 214 CSRVLLVHAGDGGNSVAIITQNTKNHLLLHYSLILFDLTHTVNALHTRLEAE 59
CSR +++H DGG S LL+ +L +LTHT N L AE
Sbjct: 1415 CSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAE 1466
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1148 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1202
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1149 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1203
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1111 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1165
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1136 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1190
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1148 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1202
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 336 NDALEAFKKEADMTGE-MDRKFGGLLEKKWTSVIRL---QKKVMELESKLSEAQK 488
N E F+ EADM E + K G+ E+ + ++L QKK ELE KL +AQ+
Sbjct: 1149 NHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQ 1203
>AY095034-1|AAM11362.1| 225|Drosophila melanogaster LD25271p
protein.
Length = 225
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 282 QREELNKAIADYLGSNGYNDALEAFKKEADM 374
++ ++N+ I +YL + G+ +A E F+ EAD+
Sbjct: 25 KQADMNRLIMNYLVTEGFKEAAEKFQHEADL 55
>AE014298-2748|AAF48867.1| 225|Drosophila melanogaster CG6617-PA
protein.
Length = 225
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 282 QREELNKAIADYLGSNGYNDALEAFKKEADM 374
++ ++N+ I +YL + G+ +A E F+ EAD+
Sbjct: 25 KQADMNRLIMNYLVTEGFKEAAEKFQHEADL 55
>AY129432-1|AAM76174.1| 744|Drosophila melanogaster GM04379p
protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 QPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWT 425
Q ++MV + +EEL K + + + +N E +++ + +M K + +
Sbjct: 475 QEKLIEMVSHRSNQEELIKRLGNEIQEKTHNFEEELKRQQEQLANQMQTKATEVESENKR 534
Query: 426 SVIRLQKKVMELE--SKLSEAQKEFIE 500
+ + +QK ELE +K +AQ++ +E
Sbjct: 535 NAVEIQKLKSELEERNKAFKAQQDKLE 561
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p protein.
Length = 1012
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/97 (20%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 243 HQPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEM--DRKFGGLLEK 416
HQ + ++ ++ +++ Y G+ NDA +A + +AD E+ K + +
Sbjct: 785 HQIGKPAPLFAKLEQSFIDELKGKYGGAQATNDAAQAVQAQADKVRELKASTKDKAIWQP 844
Query: 417 KWTSVIRLQKKVMELESKLSEAQKEFIEGAPTRAKRT 527
+ T ++ L+K++ E + K + A AP+ ++
Sbjct: 845 EVTKLLDLKKQLEEAKKKTATAAAPAATPAPSNGSQS 881
>AY089639-1|AAL90377.1| 595|Drosophila melanogaster RE56519p
protein.
Length = 595
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 QPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWT 425
Q ++MV + +EEL K + + + +N E +++ + +M K + +
Sbjct: 326 QEKLIEMVSHRSNQEELIKRLGNEIQEKTHNFEEELKRQQEQLANQMQMKATEVESENKR 385
Query: 426 SVIRLQKKVMELE--SKLSEAQKEFIE 500
+ + +QK ELE +K +AQ++ +E
Sbjct: 386 NAVEIQKLKSELEERNKAFKAQQDKLE 412
>AY070634-1|AAL48105.1| 237|Drosophila melanogaster RH01588p
protein.
Length = 237
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +3
Query: 240 KHQPTTM---KMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADM 374
+++P+T +M+ Q ++ +LN+ + +YL + GY +A + F EA +
Sbjct: 3 EYRPSTSWPHRMMSFQCRQADLNRLVMNYLVTEGYQEAAKRFMTEASV 50
>AE014297-2081|AAN13676.1| 744|Drosophila melanogaster CG17604-PC,
isoform C protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 QPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWT 425
Q ++MV + +EEL K + + + +N E +++ + +M K + +
Sbjct: 475 QEKLIEMVSHRSNQEELIKRLGNEIQEKTHNFEEELKRQQEQLANQMQMKATEVESENKR 534
Query: 426 SVIRLQKKVMELE--SKLSEAQKEFIE 500
+ + +QK ELE +K +AQ++ +E
Sbjct: 535 NAVEIQKLKSELEERNKAFKAQQDKLE 561
>AE014297-2080|AAN13675.1| 744|Drosophila melanogaster CG17604-PB,
isoform B protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 QPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWT 425
Q ++MV + +EEL K + + + +N E +++ + +M K + +
Sbjct: 475 QEKLIEMVSHRSNQEELIKRLGNEIQEKTHNFEEELKRQQEQLANQMQMKATEVESENKR 534
Query: 426 SVIRLQKKVMELE--SKLSEAQKEFIE 500
+ + +QK ELE +K +AQ++ +E
Sbjct: 535 NAVEIQKLKSELEERNKAFKAQQDKLE 561
>AE014297-2079|AAF55223.1| 744|Drosophila melanogaster CG17604-PA,
isoform A protein.
Length = 744
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 QPTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWT 425
Q ++MV + +EEL K + + + +N E +++ + +M K + +
Sbjct: 475 QEKLIEMVSHRSNQEELIKRLGNEIQEKTHNFEEELKRQQEQLANQMQMKATEVESENKR 534
Query: 426 SVIRLQKKVMELE--SKLSEAQKEFIE 500
+ + +QK ELE +K +AQ++ +E
Sbjct: 535 NAVEIQKLKSELEERNKAFKAQQDKLE 561
>AE013599-2465|AAF57866.2| 237|Drosophila melanogaster CG18467-PA
protein.
Length = 237
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +3
Query: 240 KHQPTTM---KMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADM 374
+++P+T +M+ Q ++ +LN+ + +YL + GY +A + F EA +
Sbjct: 3 EYRPSTSWPHRMMSFQCRQADLNRLVMNYLVTEGYQEAAKRFMTEASV 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,308,919
Number of Sequences: 53049
Number of extensions: 497207
Number of successful extensions: 1303
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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