Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n10f
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.33
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.33
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 32 0.33
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 32 0.33
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 32 0.33
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 31 0.57
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 31 0.57
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 31 0.76
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 29 1.7
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 29 1.7
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 1.7
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 29 1.7
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.3
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.3
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 2.3
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 29 3.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.1
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 29 3.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.1
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 4.0
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 4.0
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 28 5.3
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 5.3
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 9.3
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 27 9.3
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 33.9 bits (74), Expect = 0.081
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEK--REAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY 512
E + +V + + K E K + ++EL ++L D LEG+E+ + +LE A+V
Sbjct: 882 ELQHKLVVGESQVENVKEELIGAKIMNKEMVDELNAKLGDALEGMEELKKSLEVSEAKVQ 941
Query: 513 KAIEDKMTTAADKRDE 560
+ E+ + + RD+
Sbjct: 942 RREEELIAQVSKHRDQ 957
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 500
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 500
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 500
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 500
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 31.9 bits (69), Expect = 0.33
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 201 EKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 380
E +VE + E L+A +E+ LE ++ SE + + EA+
Sbjct: 148 EHKEAVETLVEALRAEKEK---LEKILEDARKKDDEIEELKKKVNSESSRATLA--DEAV 202
Query: 381 DAKMETHEEK-REAYINELRS---RLKDHLEGVEKTRLTLEQQTAEV 509
K++T ++K E Y+N++R LKD+ EG+EK ++ + E+
Sbjct: 203 Q-KLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEI 248
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 387 KMETHEEKREAYINE-LRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTT 539
K+E+ +E + ++E L L++ + +KTR TLE+Q + A+E+++ T
Sbjct: 862 KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEERIGT 913
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 387 KMETHEEKREAYINE-LRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTT 539
K+E+ +E + ++E L L++ + +KTR TLE+Q + A+E+++ T
Sbjct: 862 KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEERIGT 913
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 393 ETHEEKR--EAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADK 551
E HE K+ E +NEL R K HL+ +E+ R EQ + E K E ++ A+K
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLR---EQISIEKSKLAELQVVLDAEK 473
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 336 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 515
SE +++ + +D + EEK E +NE+ LK E V+ + E +T EV
Sbjct: 392 SEINEKILISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGELKTREVNM 451
Query: 516 AIED 527
E+
Sbjct: 452 TSEN 455
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINE---LRSRLKDHLEGVEKTRLTLEQQTAEV 509
E T + EALDA+ + H+ R A E L D E EK+++TL + +
Sbjct: 87 ETTEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEAL 146
Query: 510 YKAIEDKMTT 539
KA E + T
Sbjct: 147 KKARESCLRT 156
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 339 EQTNNFIVATKEALDAKMETHEEKREAYINE---LRSRLKDHLEGVEKTRLTLEQQTAEV 509
E T + EALDA+ + H+ R A E L D E EK+++TL + +
Sbjct: 87 ETTEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEAL 146
Query: 510 YKAIEDKMTT 539
KA E + T
Sbjct: 147 KKARESCLRT 156
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 369 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 548
+E AK++ +EE+R + LK E EK +L EQ+ K +E++ A D
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEE----KEMEERRRAADD 120
Query: 549 KR 554
+R
Sbjct: 121 RR 122
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 369 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 548
+E AK++ +EE+R + LK E EK +L EQ+ K +E++ A D
Sbjct: 899 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEE----KEMEERRRAADD 954
Query: 549 KR 554
+R
Sbjct: 955 RR 956
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 369 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 548
+E AK++ +EE+R + LK E EK +L EQ+ K +E++ A D
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEE----KEMEERRRAADD 120
Query: 549 KR 554
+R
Sbjct: 121 RR 122
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 387 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 548
K + H+E+ +NE +D + +EK R LEQQ E+ + I+ + + D
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGD 1060
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 387 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 548
K + H+E+ +NE +D + +EK R LEQQ E+ + I+ + + D
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGD 1060
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +3
Query: 381 DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDE 560
D+KM+ EEK ++ +E + K E EK++ + +++ + + E+K DK++E
Sbjct: 44 DSKMKAPEEKEKSKKSEKKEEPKKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEE 103
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Frame = +3
Query: 324 SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLK---------DHLEGVEKT 476
SRI+ E+ I + + + + + ++EA + ELR K D L +E
Sbjct: 40 SRIKQEEAFRQITQQNQDFELRRQRKQNEQEARLEELRRSAKIENDRKNREDEL-AIETM 98
Query: 477 RLTLEQQTAEVYKAIEDKMTTAADKRDE 560
+ Q+ EVY D + + K+DE
Sbjct: 99 KFENSQRNTEVYSPYLDSLKEKSLKQDE 126
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 206 DSFRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVPHP 334
D+F+ + R ++GS +GS DG CS D + P P
Sbjct: 351 DTFKNQSRRSSQGSHDSAITMGSEEDGSRCSPDRDKQTPSPAP 393
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 3.1
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Frame = +3
Query: 177 VPRRADSPEKTPSVEEIQ-EKLKAAEERRRSLEXXXXXXXXXXXXXXXXXS--------- 326
+PR+ + + P+ E + +K++ ++R RS E S
Sbjct: 307 IPRKIEKEKPRPTTENVVLKKVEMEKKRPRSPELVPKKIVMEKERPSSPDSEAEEREHNL 366
Query: 327 RIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 506
RI E+ + +EAL + + EE ++ ELR ++ LE E TR + AE
Sbjct: 367 RIEKERHQKELEFRREALRKREQEREEHKKRAQEELRRQMTAALE--ESTR-----RQAE 419
Query: 507 VYKAIEDKMTTAADKRDE 560
+ + IED+ A KRDE
Sbjct: 420 MNRQIEDE----ARKRDE 433
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 206 DSFRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVPHP 334
D+F+ + R ++GS +GS DG CS D + P P
Sbjct: 351 DTFKNQSRRSSQGSHDSAITMGSEEDGSRCSPDRDKQTPSPAP 393
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +3
Query: 183 RRADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIV 362
RR + K EE EKL +R +++ R+++E+ +
Sbjct: 881 RRREEKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE 940
Query: 363 ATK-EALDAKMETHEEKREAYINELRSRLKDHLEGV--EKTRLTLEQQ 497
K +A + K++ +E+ + + RLK E V EK ++ E+Q
Sbjct: 941 KEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQ 988
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 28.3 bits (60), Expect = 4.0
Identities = 27/122 (22%), Positives = 53/122 (43%)
Frame = +3
Query: 183 RRADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIV 362
R+ + K EE EKL A ER R+++ R+++E+
Sbjct: 856 RKREEKRKEKEAEEENEKLIAERERMRAIKEEEERVKAEREKVKKEEERLKAEE------ 909
Query: 363 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTA 542
E + + E ++EK +A E R + ++ +EK ++ E+Q ++ A E++
Sbjct: 910 ---EKVKVEKERNKEKVKA--EEERLKAEEEKVKIEKEKVKAEEQ--KIKSAEEERRKER 962
Query: 543 AD 548
A+
Sbjct: 963 AE 964
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 186 RADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXX-SRIRSEQTNNFIV 362
R+D E + ++Q +L ++++R LE SRI +E T +
Sbjct: 336 RSDMEELEAQIRDLQSQL--SDQKRTHLEEKQTWDSTIGLLNEKVECSRIENEFTKQEMK 393
Query: 363 ATKEALDAKMETHEEKREAYINELRSRLKD 452
+ +KM E + I++LRSR++D
Sbjct: 394 RQGDQHQSKMLEKENELRKTISDLRSRMRD 423
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 393 ETHEEKREAYINELRSR-LKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDEN 563
E H+EK+ + + + + +DH G+E+T ++++ + E I + MTT + N
Sbjct: 113 EKHDEKKMSDNDVITNEEAEDHARGIERTTMSIKPREGE----ITEPMTTTTQMPEHN 166
>Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 186 RADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXX-SRIRSEQTNNFIV 362
R+D E + ++Q +L ++++R LE SRI +E T +
Sbjct: 336 RSDMEELEAQIRDLQSQL--SDQKRTHLEEKQTWDSTIGLLNEKVECSRIENEFTKQEMK 393
Query: 363 ATKEALDAKMETHEEKREAYINELRSRLKD 452
+ +KM E + I++LRSR++D
Sbjct: 394 RQGDQHQSKMLEKENELRKTISDLRSRMRD 423
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 168 GVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSL 269
GVP+P+ EK +E +EK+K+ EE R L
Sbjct: 179 GVPIPKIDIEIEKASPKKEKKEKVKSPEELTRRL 212
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 172 TPTGSASITSYARPPFDISWQRISVDLVSTSMASTFNRQRLRTS*TASDDHNRQTDN 2
TP + + S PP S R + ++++ STFNR + + SDD R D+
Sbjct: 62 TPKSAPAPKSPKSPPARRSIPRAAATAANSTINSTFNRSEIEEM-SDSDDDMRDDDD 117
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 369 KEALDAKMETHEEKREAYINELRSR-LKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAA 545
K A ++ +++R+A E R R ++H E +++ EQQ E +AIE+
Sbjct: 2536 KLAAHHQLVEQQKQRDAREREAREREAREHQERMQREAYMKEQQLLERKRAIEENNRIME 2595
Query: 546 DKRDE 560
+++ E
Sbjct: 2596 EQQRE 2600
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 156 AEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEE 254
AE P P ++P P+VEE AAEE
Sbjct: 619 AEETPAPAPAVEETPAPAPAVEETPAPAPAAEE 651
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 172 TPTGSASITSYARPPFDISWQRISVDLVSTSMASTFNRQRLRTS*TASDDHNRQTDN 2
TP + + S PP S R + ++++ STFNR + + SDD R D+
Sbjct: 62 TPKSAPAPKSPKSPPARRSIPRAAATAANSTINSTFNRSEIEEM-SDSDDDMRDDDD 117
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 9.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 324 SRIRSEQTNNFIVA-TKEALDAKMET---HEEKREAYINELRSRLKDHLEGVEKTRLTLE 491
+ IR E F +A TK AK+ + HEEKR+ E+R++ ++ + +E + L
Sbjct: 830 AHIRKEIELEFKLARTKSEFTAKIASKASHEEKRKKEDEEMRAKYRELAQCLEDAKSGLH 889
Query: 492 QQTA 503
++ A
Sbjct: 890 EKIA 893
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,340,361
Number of Sequences: 27780
Number of extensions: 181677
Number of successful extensions: 927
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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