Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11n09f
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   299   2e-81
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   299   2e-81
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   299   2e-81
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   299   2e-81
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   299   2e-81
AY094778-1|AAM11131.1|  570|Drosophila melanogaster LD09231p pro...    30   2.1  
AE014297-2310|AAF55387.2|  570|Drosophila melanogaster CG5175-PB...    30   2.1  
AE014297-2309|AAN13733.1|  570|Drosophila melanogaster CG5175-PA...    30   2.1  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  299 bits (734), Expect = 2e-81
 Identities = 139/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 39  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 218
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 219 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 398
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 399 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 572
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PAKK   +K L+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPAKKKLSKKKLQ 176



 Score = 35.5 bits (78), Expect = 0.055
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 536 PSEEKLSKKKLARQKEKMMR 595
           P+++KLSKKKL RQKEKM+R
Sbjct: 165 PAKKKLSKKKLQRQKEKMLR 184


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  299 bits (734), Expect = 2e-81
 Identities = 139/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 39  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 218
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 219 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 398
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 399 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 572
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PAKK   +K L+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPAKKKLSKKKLQ 176



 Score = 35.5 bits (78), Expect = 0.055
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 536 PSEEKLSKKKLARQKEKMMR 595
           P+++KLSKKKL RQKEKM+R
Sbjct: 165 PAKKKLSKKKLQRQKEKMLR 184


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  299 bits (734), Expect = 2e-81
 Identities = 139/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 39  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 218
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 219 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 398
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 399 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 572
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PAKK   +K L+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPAKKKLSKKKLQ 176



 Score = 35.5 bits (78), Expect = 0.055
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 536 PSEEKLSKKKLARQKEKMMR 595
           P+++KLSKKKL RQKEKM+R
Sbjct: 165 PAKKKLSKKKLQRQKEKMLR 184


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  299 bits (734), Expect = 2e-81
 Identities = 139/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 39  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 218
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 219 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 398
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 399 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 572
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PAKK   +K L+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPAKKKLSKKKLQ 176



 Score = 35.5 bits (78), Expect = 0.055
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 536 PSEEKLSKKKLARQKEKMMR 595
           P+++KLSKKKL RQKEKM+R
Sbjct: 165 PAKKKLSKKKLQRQKEKMLR 184


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  299 bits (734), Expect = 2e-81
 Identities = 139/178 (78%), Positives = 156/178 (87%)
 Frame = +3

Query: 39  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 218
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 219 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 398
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 399 RAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKSFPRKSLR 572
           RA CLRRRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PAKK   +K L+
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPAKKKLSKKKLQ 176



 Score = 35.5 bits (78), Expect = 0.055
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +2

Query: 536 PSEEKLSKKKLARQKEKMMR 595
           P+++KLSKKKL RQKEKM+R
Sbjct: 165 PAKKKLSKKKLQRQKEKMLR 184


>AY094778-1|AAM11131.1|  570|Drosophila melanogaster LD09231p
           protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 299 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 451
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


>AE014297-2310|AAF55387.2|  570|Drosophila melanogaster CG5175-PB,
           isoform B protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 299 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 451
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


>AE014297-2309|AAN13733.1|  570|Drosophila melanogaster CG5175-PA,
           isoform A protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 299 RRIPLAVIEER*IKR*QQNFGR*QASYRPHSGKSRALPTQTYIPCSRSHQP 451
           RR+PL++     + R QQ+ G    S  P +G  +   T++++P  +S+QP
Sbjct: 23  RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,374,596
Number of Sequences: 53049
Number of extensions: 576242
Number of successful extensions: 1722
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)