Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n08f
(450 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 73 1e-13
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 69 2e-12
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 67 7e-12
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 66 1e-11
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 63 1e-10
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 62 3e-10
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 61 4e-10
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 5e-10
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 60 6e-10
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 60 8e-10
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 60 1e-09
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 59 1e-09
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 58 3e-09
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 55 2e-08
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 55 2e-08
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 55 3e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 53 1e-07
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 52 2e-07
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 49 2e-06
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 49 2e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 48 4e-06
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 45 3e-05
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 44 8e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 42 3e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 40 0.001
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 37 0.007
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 37 0.009
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 37 0.009
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.009
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.015
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 33 0.082
SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18) 27 5.4
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12) 27 9.5
SB_49923| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D +CAG G +DSC+GDSGGP K + +V S + I H G S+G+GCA+ PGIY
Sbjct: 610 DKVICAGYEGGKIDSCKGDSGGPFVCK-DPRVTSRF-ILH--GAVSWGVGCARKGQPGIY 665
Query: 198 TRVSSFIDWIENIV 239
T + +++WI+NIV
Sbjct: 666 TDIKKYLNWIDNIV 679
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 68.5 bits (160), Expect = 2e-12
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D LCAG GG+D+CQGDSGGPL + N + +HI G TS+G GCA N G+Y
Sbjct: 117 DSMLCAGLDAGGIDACQGDSGGPLVCEYNGR-------WHIEGATSWGYGCASPNQYGVY 169
Query: 198 TRVSSFIDWIENIV 239
V W++ I+
Sbjct: 170 AHVRYLKAWVQGIM 183
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 66.9 bits (156), Expect = 7e-12
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = +3
Query: 12 LMDHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPG 191
+ ++ LCAG GGVDSCQGDSGGP V N + + ++GVTS+G GCA+A G
Sbjct: 389 ITENMLCAGMRQGGVDSCQGDSGGPF-VCTNPENPRQWT---LVGVTSWGKGCARALKYG 444
Query: 192 IYTRVSSFIDWIENI 236
IY V ++ WI I
Sbjct: 445 IYANVRRYLHWINLI 459
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 66.5 bits (155), Expect = 1e-11
Identities = 33/74 (44%), Positives = 41/74 (55%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
+ LCAG GGVDSCQGDSGGP L + +H+ GVTS+G GCA G+Y
Sbjct: 198 ESMLCAGLEQGGVDSCQGDSGGP------LVCEDTNGRWHLEGVTSWGYGCAAPRMYGVY 251
Query: 198 TRVSSFIDWIENIV 239
V DWI ++
Sbjct: 252 ASVRYLRDWINGVM 265
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D LCAG GG+D+CQGDSGGPL + + +HI G TS+G GCA N G+Y
Sbjct: 461 DSMLCAGLDAGGIDACQGDSGGPLVCEYKGR-------WHIEGATSWGYGCASPNQYGVY 513
Query: 198 TRVSSFIDWIENIV 239
V W++ I+
Sbjct: 514 AHVRYLKAWVQGIM 527
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D LCAG GG+D+CQGDSGGP+ V + ++I G TS+G GCAQ G+Y
Sbjct: 866 DSMLCAGLDQGGIDTCQGDSGGPM-------VCESRGRFYIHGATSWGYGCAQPGKFGVY 918
Query: 198 TRVSSFIDW 224
V + + W
Sbjct: 919 AHVKNLVAW 927
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 12 LMDHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQANTP 188
+ D +CAG V C GDSGGP + ++ D Y + G S+G G C +
Sbjct: 226 ITDSMVCAGVPGSVVSGCHGDSGGPY---VCIQPDGRYVLQ---GDVSWGSGRCDSSQMF 279
Query: 189 GIYTRVSSFIDWIE 230
++ RV+ F +WI+
Sbjct: 280 TVFGRVAHFRNWID 293
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +3
Query: 12 LMDHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPG 191
L + +CAG+ +GG+DSCQGDSGGP+ + N K +++ GV S+GIGCA+ G
Sbjct: 35 LHESMVCAGRASGGIDSCQGDSGGPMVCEYNGK-------FNLEGVVSWGIGCARPGKYG 87
Query: 192 IYTR 203
+Y +
Sbjct: 88 VYAK 91
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 51 GVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVSSFIDWI 227
G+D+CQGDSGGPL + N N + ++GVTS+G GCA + PGIY +++ DW+
Sbjct: 395 GIDTCQGDSGGPLVCENN-------NKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWV 446
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 60.9 bits (141), Expect = 5e-10
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
+CAG GGVD+CQGDSGGPL V N + + GVTS+G GCA A G+Y V
Sbjct: 800 ICAGNPEGGVDTCQGDSGGPL-------VCQHGNQWFLTGVTSWGHGCAFAGKYGVYAGV 852
Query: 207 SSFIDWIENIV 239
W+ +++
Sbjct: 853 QQLKQWVFHVM 863
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 60.5 bits (140), Expect = 6e-10
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
LCAG GG+D+CQ DSGGPL K + ++I G TS+G GCA++ G+Y V
Sbjct: 283 LCAGLDKGGIDACQRDSGGPLVSKTGER-------FYIHGATSWGYGCARSGKFGVYAHV 335
Query: 207 SSFIDWI 227
+ I W+
Sbjct: 336 KNLIGWV 342
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 60.1 bits (139), Expect = 8e-10
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D +CAG GG+D+CQGDSGGP+ V ++I G TS+G GCA G+Y
Sbjct: 67 DSMICAGIDKGGIDACQGDSGGPM-------VCENGGRFYIHGATSWGYGCAAPGLYGVY 119
Query: 198 TRVSSFIDWIEN 233
+V + WI++
Sbjct: 120 AKVKYLLPWIKD 131
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 HQLCAG-KLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHII-GVTSFGIGCAQANTPGI 194
+ CAG + + D+CQGDSGGP V L H++ GV S+G GC + G+
Sbjct: 291 NMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGV 350
Query: 195 YTRVSSFIDWIEN 233
YTR+ +FIDWI N
Sbjct: 351 YTRLFNFIDWILN 363
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG GG+D+CQGDSGGPL K ++++++G S+G+GCA+ G+Y +
Sbjct: 282 CAGYGAGGIDACQGDSGGPLVCKEG-------DVWYLMGAISWGVGCARGGRYGVYADMM 334
Query: 210 SFIDWIENIV 239
W+++ +
Sbjct: 335 DLKYWVQSTI 344
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
+ LCAG GG CQ DSGGPL S ++++ G+ S+G+GC AN G+Y
Sbjct: 209 ERALCAGPREGGCGPCQFDSGGPLAC-------SEGGLWYMYGIVSYGVGCGVANKFGVY 261
Query: 198 TRVSSFIDWIENIV 239
+ + DW+ + +
Sbjct: 262 SNMYELTDWVRDTI 275
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 58.0 bits (134), Expect = 3e-09
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 HQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFG--IGCAQANTPGI 194
+ CAG+ +GG D CQGDSGG + DSA + + GV S+G +GC N G+
Sbjct: 290 NMFCAGQASGGKDICQGDSGGGF-----VLYDSAKQKWFLGGVVSWGSSLGCGLPNKYGV 344
Query: 195 YTRVSSFIDWI 227
Y RV+ F+ WI
Sbjct: 345 YVRVTQFLGWI 355
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 55.2 bits (127), Expect = 2e-08
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIY 197
D CAG GG DSC GDSGGP L +A Y + GV S+G GCA+ G+Y
Sbjct: 161 DRYFCAGFPQGGRDSCGGDSGGP------LVCSNADGQYVLRGVVSWGEGCARPKKYGVY 214
Query: 198 TRVSSFIDWIENIV--WP*KCGAKM---ENN 275
V + +IE + +P KCG + ENN
Sbjct: 215 LDVRRTLPFIEGTIQGYP-KCGVRYLPPENN 244
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
LCAG GGVD+CQ DSGGPL I + +++ GV S+G CA+ G+Y +
Sbjct: 220 LCAGFDQGGVDACQFDSGGPLSCSIGSR-------FYLTGVVSWGHECARPKKYGVYANM 272
Query: 207 SSFIDWI-ENIVW 242
W+ + I W
Sbjct: 273 MRMTSWVRDTIAW 285
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
LCAG GGVD+CQ DSGGPL + + +++ GV S+G C + G+Y +
Sbjct: 159 LCAGFERGGVDACQYDSGGPLACEERGR-------WYLTGVVSYGHECGNPHKYGLYADM 211
Query: 207 SSFIDWIENIV 239
++ W+ENI+
Sbjct: 212 ATLNTWVENII 222
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 4e-08
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +3
Query: 48 GGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVSSFIDWI 227
GG+DSCQGDSGGP+ + N + +++ GV S+G GCA G+Y +V +WI
Sbjct: 272 GGIDSCQGDSGGPMVCENNGR-------FYLDGVVSWGHGCAGRGKFGVYAKVRYVKEWI 324
Query: 228 ENIV 239
E+ +
Sbjct: 325 ESYI 328
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 54.0 bits (124), Expect = 5e-08
Identities = 26/70 (37%), Positives = 40/70 (57%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG+ GG D+C+GDSGG ++ + + Y + G+ S+G GC G YTRV
Sbjct: 218 CAGEGKGGNDTCRGDSGGSFVREV--RREGKYR-WVSAGIVSWGEGCGIKGKYGFYTRVE 274
Query: 210 SFIDWIENIV 239
S++ WI + +
Sbjct: 275 SYLSWINSTI 284
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 27 LCAGKLT-GGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTR 203
LCAG+ +CQGDSGGPL + N + +Y GV SFG G + + +YT+
Sbjct: 114 LCAGEAKPNAAGACQGDSGGPLVCERN----GQWTLY---GVVSFGAGNCEVTSYTVYTK 166
Query: 204 VSSFIDWI 227
VS+++DWI
Sbjct: 167 VSNYLDWI 174
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG GG D+C GDSGG V+ + + Y + G+ S+G GC Q + G YTRV
Sbjct: 276 CAGDGKGGNDTCHGDSGGSF-VR-EFRREGKYR-WVSAGIVSWGEGCGQKDKYGFYTRVE 332
Query: 210 SFIDWI 227
++ WI
Sbjct: 333 PYVHWI 338
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +3
Query: 3 WCGLMDHQ-LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQA 179
+ G++ Q +CAG GG D C GDSGGPL + + + + G+ S+G CA
Sbjct: 152 YSGIIHEQFMCAGYNQGGQDGCLGDSGGPLSCQ------TESGDWVLTGLMSWGEKCALP 205
Query: 180 NTPGIYTRVSSFIDWIENIVWP-*KCGAK 263
+ G+YT V + +IE+ ++ KCG +
Sbjct: 206 DKYGVYTDVRRMLPFIESTLYGYPKCGIR 234
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
LCAG G DSC+ DSGGPL + + Y+ +G+ S+G CA+A+ G+Y+R+
Sbjct: 208 LCAGYERGLKDSCEFDSGGPLACQKGGR-------YYAVGLVSWGDECARAHKFGVYSRM 260
Query: 207 SSFIDWI 227
+ W+
Sbjct: 261 AKLTPWM 267
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG + G D+C+GDSG P+ VK + D +++ +G++S+G GCAQ G+Y +
Sbjct: 902 CAGDVMGERDACKGDSGSPIVVK---RTDGSWS---AVGLSSWGEGCAQKGKFGVYADLL 955
Query: 210 S 212
S
Sbjct: 956 S 956
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 27 LCAGKLT-GGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTR 203
+C G T SCQGDSGGPL + + + H G TSFG C+ + +YTR
Sbjct: 491 ICVGFNTENAASSCQGDSGGPLVCE-----EEGRWVLH--GATSFGKSCSPKHY-SVYTR 542
Query: 204 VSSFIDWI 227
V+S++ WI
Sbjct: 543 VNSYMKWI 550
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 27 LCAGKLTGGVDS-CQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTR 203
LCAG+ G C GDSGGPL + N + +++ G S+G ++ R
Sbjct: 249 LCAGEARSGASGGCNGDSGGPLVCEDNGR-------WYLHGAVSYGKLHCPTTYYTVFAR 301
Query: 204 VSSFIDWIENIVWP*KCGAK 263
V+S+ DWI+ + P CG +
Sbjct: 302 VASYTDWIKQVTGP-ICGKR 320
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 43.6 bits (98), Expect = 8e-05
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGI-GCAQANTPGIYTRV 206
CAG +C+GDSGGPL V + + ++GVTS+ GCA + G+Y V
Sbjct: 1959 CAGIYGTPKGTCKGDSGGPL-------VCESKGRWVLMGVTSWSYNGCADSGYAGVYADV 2011
Query: 207 SSFIDWIENIV 239
F DWI V
Sbjct: 2012 VYFKDWIRQTV 2022
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 30 CAGKL-TGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
CAG+ G C GDSGGPL V ++ + G S+G + ++TRV
Sbjct: 662 CAGEARVGAAGGCNGDSGGPL-------VCEQSGVWVLHGAVSYGARWCPTDYYTVFTRV 714
Query: 207 SSFIDWIENIVWP*KCGA 260
SS++ WI + P + G+
Sbjct: 715 SSYVAWINGKIDPTEGGS 732
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 27 LCAGKL-TGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTR 203
LCAG+ + C GDSGGPL + N + + G S+G+ ++ R
Sbjct: 934 LCAGEARSDAAGGCNGDSGGPLVCEDN-------GSWFLHGAVSYGMKYCPTTHYTVFAR 986
Query: 204 VSSFIDWIENI 236
V+S+ DWI+ +
Sbjct: 987 VASYTDWIKRM 997
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGI-----GCAQANTPG 191
LCAG LT V +C DSG PL + + + + G+ S+G+ GC +
Sbjct: 841 LCAGFLTSDV-TCISDSGSPLMFPVPHAQNPNVKRWILGGILSWGLNTLTPGCHSDYSHS 899
Query: 192 IYTRVSSFIDWIENIVWP*K 251
Y + S++ WI +IV P K
Sbjct: 900 AYVDIGSYLKWIRSIVKPKK 919
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.5 bits (93), Expect = 3e-04
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQANTPGIYTR 203
+CAG G +C GDSGGPLQ N + + + GV S+ NT +Y R
Sbjct: 459 ICAGG--AGSSACNGDSGGPLQCLENER-------WVLRGVASWVTAETCPGNTFSVYAR 509
Query: 204 VSSFIDWIEN 233
VSS+ +WIE+
Sbjct: 510 VSSYSNWIES 519
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
+CAG + G+ CQGDSGGP V + + + G S+G + ++ RV
Sbjct: 244 ICAGGM--GMGGCQGDSGGPF-------VCNEGGRWVLRGAVSWGQPMCGTDHYTVFARV 294
Query: 207 SSFIDWIENIV 239
SSFIDWI +++
Sbjct: 295 SSFIDWINDMM 305
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 18 DHQLCAGKLTGGVDSCQGDSGGPL 89
+ LCAG GGVD+CQGDSGGP+
Sbjct: 491 ESMLCAGLDAGGVDACQGDSGGPM 514
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQ 92
LCAG GGVD+CQ DSGGPLQ
Sbjct: 129 LCAGFKEGGVDACQYDSGGPLQ 150
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 27 LCAGKLTGGVDS--CQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQANTPGIY 197
LCAG + C GDSGGPL K ++ + + GVTS+G C ++
Sbjct: 289 LCAGYNDNKTQTSGCIGDSGGPLM----CKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVF 344
Query: 198 TRVSSFIDWI 227
T+VS+F+ WI
Sbjct: 345 TKVSNFVQWI 354
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 27 LCAGKL-TGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTR 203
LCAG+ + C GDSGGPL + N + + G S+G+ ++ R
Sbjct: 604 LCAGEARSDAAGGCNGDSGGPLVCEDN-------GSWFLHGAVSYGLRNCPTTHYTVFAR 656
Query: 204 VSSFIDWIENI 236
V+S+ DWI+ +
Sbjct: 657 VASYTDWIKRM 667
Score = 35.1 bits (77), Expect = 0.027
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 63 CQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVSSFIDWIENI 236
C GDSGGPL + N + + G S+G+ ++ RV+S+ DWI+ +
Sbjct: 283 CNGDSGGPLVCEDN-------GSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIKRM 333
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 27 LCAGKL-TGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQANTPGIYT 200
LCAG G + C GDSGGP + + + + GV S+G C+ AN ++
Sbjct: 211 LCAGDAGKTGKNGCNGDSGGPFVCR------NTAGQWVLQGVVSWGDPECSSANHFSVFA 264
Query: 201 RVSSFIDWIENIV 239
RVS WI+ ++
Sbjct: 265 RVSVLRHWIDKVI 277
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 WCGLMDHQLCAGKLTGG-VDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQ 176
W + +C G G + C GDSGGP + + K ++I GV S+G C+
Sbjct: 1494 WGVVTSRMICGGFGAGSTISGCFGDSGGPFVCQGSNKR------WNIQGVVSWGTRTCSS 1547
Query: 177 A-NTPGIYTRVSSFIDWIENIV 239
N +Y RV+ F+ WI +
Sbjct: 1548 GQNEYTVYARVAQFVPWIRKYI 1569
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIG-CAQANTPGIYTR 203
LCAG + SC GDSGGP + ++ D Y + G S+G G C ++ R
Sbjct: 2 LCAGVENSILSSCHGDSGGPY---VCVQPDGRYVLQ---GDVSWGSGKCDAKQMFTVFGR 55
Query: 204 VSSFIDWIEN 233
V+ F +WI++
Sbjct: 56 VAHFRNWIDH 65
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
+CAG G CQGDSGGPL V + + + G+ S+G ++TRV
Sbjct: 576 VCAGG--PGRGGCQGDSGGPL-------VCNEAGRWVLRGIVSWGSRECSTEFYTVFTRV 626
Query: 207 SSFIDWIENIV 239
+++ WIE I+
Sbjct: 627 INYMPWIETIL 637
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRV 206
+CAG G CQGDSGGPL V + + + G+ S+G ++TRV
Sbjct: 116 VCAGG--PGRGGCQGDSGGPL-------VCNEAGRWVLRGIVSWGSRECSTEFYTVFTRV 166
Query: 207 SSFIDWIENIV 239
+++ WIE I+
Sbjct: 167 INYMPWIETIL 177
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 36.7 bits (81), Expect = 0.009
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGI-YTR 203
+CAG G +C GDSGGPL V + + G S+G + + Y R
Sbjct: 484 ICAGG--SGSSACSGDSGGPL-------VCHEGGTWVLRGAVSWGTSHSCPGRMFVAYAR 534
Query: 204 VSSFIDWIENI 236
+SS IDWIE I
Sbjct: 535 ISSHIDWIERI 545
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 35.9 bits (79), Expect = 0.015
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG C GDSGGPL V + ++G++S+G C QA P +++ V
Sbjct: 469 CAGTEGVAKAVCSGDSGGPL-------VCERGGRWFLMGLSSWGWVCPQAR-PKVFSDVL 520
Query: 210 SFIDWI 227
+ +DWI
Sbjct: 521 AAMDWI 526
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 35.9 bits (79), Expect = 0.015
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG C GDSGGPL V + ++G++S+G C QA P +++ V
Sbjct: 718 CAGTEGVAKAVCSGDSGGPL-------VCERGGRWFLMGLSSWGWVCPQAR-PKVFSDVL 769
Query: 210 SFIDWI 227
+ +DWI
Sbjct: 770 AAMDWI 775
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.9 bits (79), Expect = 0.015
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQA--NTPGIYT 200
+C G G +C GDSGGPL + K + + GV S+ + +Q N +Y
Sbjct: 110 MCVGG--AGSSACNGDSGGPLVCEEGGK-------WVLRGVASW-VATSQCPVNNYSVYA 159
Query: 201 RVSSFIDWIEN 233
RVSS +DWI++
Sbjct: 160 RVSSDVDWIQD 170
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 33.5 bits (73), Expect = 0.082
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 30 CAGKLTGGVDSCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS 209
CAG + C GD G P+ ++ + I+G+ + GCAQ YTRVS
Sbjct: 327 CAGFRRKPLAPCFGDVGSPMVIQ-----SPRTGRWVIVGLFGWSEGCAQPRKYAYYTRVS 381
Query: 210 SFIDWI 227
+D +
Sbjct: 382 KTLDTV 387
>SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 144 GVTSFGIGCAQANT-PGIYTRVSSFIDWIE 230
GV S+G QA + ++TR+SSFIDW++
Sbjct: 8 GVVSWGDPKCQAGSFYSVFTRISSFIDWMK 37
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 30.3 bits (65), Expect = 0.77
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPL 89
LCAG G D+C GD G PL
Sbjct: 1406 LCAGPAAGESDNCFGDGGSPL 1426
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGPLQVKIN 104
+CAG G C GDSGGPLQ + N
Sbjct: 134 VCAGG--AGSSICHGDSGGPLQCEEN 157
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 SCQGDSGGPLQVKINLKVDSAYNIYHIIGVTSFGIGCAQANTPGIYTRVS-SFIDWIENI 236
+C D G PL DS N+ ++GV S+G CA +YT ++ + W+ +
Sbjct: 223 ACSVDGGSPLVAN-----DS--NMLMLLGVFSWGRSCALDMKQAVYTSITHGILAWLNKL 275
Query: 237 V 239
+
Sbjct: 276 I 276
>SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18)
Length = 1076
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 3 WCGLMDHQLCAGKLTGGVDSCQGDSGG 83
W G DH L A +T V +C D GG
Sbjct: 878 WVGSHDHHLYALDITNRVSACAIDCGG 904
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 27 LCAGKLTGGVDSCQGDSGGP 86
+CAG G CQGDSGGP
Sbjct: 202 ICAGGQ--GKGGCQGDSGGP 219
>SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12)
Length = 709
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 239 YDIFYPVNETGYPS 198
YD YP+++TGYPS
Sbjct: 627 YDTGYPLHDTGYPS 640
>SB_49923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 346 YLYKSFKI*LGILQKLGNTFVLYQLFSI 263
+LY+ FKI + Q L F++YQ+F I
Sbjct: 37 HLYQVFKIAFIVYQVLKIAFIVYQVFKI 64
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,963,039
Number of Sequences: 59808
Number of extensions: 279352
Number of successful extensions: 635
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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