Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11n04f
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p pro...    28   3.8  
BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p pro...    28   3.8  
AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-P...    28   3.8  
AY119597-1|AAM50251.1|  712|Drosophila melanogaster LD19808p pro...    27   6.7  
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr...    27   6.7  
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot...    27   6.7  
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB...    27   6.7  
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA...    27   6.7  

>BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p
          protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 3  SVTLRRTKQTIKMFKYLIFVALLAFASAKP 92
          S T  + ++++ MFK ++  ALLA A A+P
Sbjct: 4  STTQTKKQKSLNMFKLVVLSALLAVAVARP 33


>BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p
           protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 183 STQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWL 82
           S  +  G   TQ + +Q+ QQLQ  C  P   WL
Sbjct: 87  SGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWL 120


>AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-PA
           protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 183 STQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWL 82
           S  +  G   TQ + +Q+ QQLQ  C  P   WL
Sbjct: 324 SGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWL 357


>AY119597-1|AAM50251.1|  712|Drosophila melanogaster LD19808p
           protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 QPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSP 97
           +PE +  T  TPG   T   P  + QQ  G+   P
Sbjct: 87  KPEVIGGTSGTPGTPSTPGTPTSHYQQNDGSARKP 121


>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
           protein.
          Length = 1711

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 QPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSP 97
           +PE +  T  TPG   T   P  + QQ  G+   P
Sbjct: 87  KPEVIGGTSGTPGTPSTPGTPTSHYQQNDGSARKP 121


>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon
           protein.
          Length = 1695

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 QPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSP 97
           +PE +  T  TPG   T   P  + QQ  G+   P
Sbjct: 87  KPEVIGGTSGTPGTPSTPGTPTSHYQQNDGSARKP 121


>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
           isoform B protein.
          Length = 1695

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 QPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSP 97
           +PE +  T  TPG   T   P  + QQ  G+   P
Sbjct: 87  KPEVIGGTSGTPGTPSTPGTPTSHYQQNDGSARKP 121


>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
           isoform A protein.
          Length = 1711

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 QPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSP 97
           +PE +  T  TPG   T   P  + QQ  G+   P
Sbjct: 87  KPEVIGGTSGTPGTPSTPGTPTSHYQQNDGSARKP 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,225,733
Number of Sequences: 53049
Number of extensions: 125746
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)