Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11n03f
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 131 3e-31
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 110 8e-25
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 91 4e-19
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 91 4e-19
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 91 4e-19
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 88 5e-18
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 88 5e-18
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.83
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 30 1.1
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 29 3.3
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 29 3.3
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 28 4.4
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 27 7.7
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 131 bits (317), Expect = 3e-31
Identities = 68/138 (49%), Positives = 94/138 (68%)
Frame = +1
Query: 175 SSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVA 354
S++A S I NVT+IG GLMGSGIAQVSA A NVT+VD + AL KA++ I +L RVA
Sbjct: 14 STTAQLSKINNVTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKRVA 73
Query: 355 KKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVA 534
KK + D+ V+ L RI +T+ +++ K ADLV+EAIVENI++K KLF +++ A
Sbjct: 74 KKKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEVAA 133
Query: 535 PSHTIFASNTSSLSINEI 588
T+ +NTSSL + +I
Sbjct: 134 KPTTLITTNTSSLRLADI 151
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 110 bits (264), Expect = 8e-25
Identities = 56/141 (39%), Positives = 90/141 (63%)
Frame = +1
Query: 169 FSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 348
F++ AMQ+ I+NV ++G G MGSGIAQV+A +G NV L DV+ AL +A K+I +++
Sbjct: 2 FTAKCAMQN-IRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTH 60
Query: 349 VAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDG 528
++KK K +E FV ++ RI T + + A ADL++EA +ENI++K +F Q++
Sbjct: 61 LSKKQ-KGTDKEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQ 119
Query: 529 VAPSHTIFASNTSSLSINEIA 591
+I +NTSS + ++A
Sbjct: 120 SCKKDSILTTNTSSFLLEDVA 140
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 91.5 bits (217), Expect = 4e-19
Identities = 48/132 (36%), Positives = 81/132 (61%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 559 NTSSLSINEIAS 594
NTS+L I +IA+
Sbjct: 492 NTSALPIKDIAA 503
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 91.5 bits (217), Expect = 4e-19
Identities = 48/132 (36%), Positives = 81/132 (61%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 352 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 410
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V +TI AS
Sbjct: 411 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 465
Query: 559 NTSSLSINEIAS 594
NTS+L I +IA+
Sbjct: 466 NTSALPIKDIAA 477
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 91.5 bits (217), Expect = 4e-19
Identities = 48/132 (36%), Positives = 81/132 (61%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V +TI AS
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESVVGPNTIIAS 491
Query: 559 NTSSLSINEIAS 594
NTS+L I +IA+
Sbjct: 492 NTSALPIKDIAA 503
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 87.8 bits (208), Expect = 5e-18
Identities = 46/132 (34%), Positives = 79/132 (59%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
+ + V+G G MG+GIA V+ G L+D + + + + + T+L+R K+ K +
Sbjct: 352 VNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQAGVERGQNHVATHLNRQLKRQ-KISK 410
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
E EK N + I+ + A K+AD+V+EA+ E++ +KHK+ +Q++ V +TI AS
Sbjct: 411 LEREKIYNHLVPTIDYS-----AMKNADVVIEAVFEDLPLKHKVIRQIENVVGPNTIIAS 465
Query: 559 NTSSLSINEIAS 594
NTS+L I +IA+
Sbjct: 466 NTSALPIKDIAA 477
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 87.8 bits (208), Expect = 5e-18
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Frame = +1
Query: 208 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEG 387
V + G G+MGSGIAQV QAG V L S L +A+++I NL RVA K D P E
Sbjct: 13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEP 72
Query: 388 ---EKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
E+ L + TD A++ A + +EA+ EN+++K +F+ + P + + +
Sbjct: 73 AALEEIAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTIQKTCPQNCMLIT 132
Query: 559 NTSSLSINEIASV 597
NTSSL ++++ V
Sbjct: 133 NTSSLKLSQMLPV 145
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 77.8 bits (183), Expect = 6e-15
Identities = 49/133 (36%), Positives = 74/133 (55%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
IK+V VIGGG MG GIA +G LV+V+N A K + R K + N
Sbjct: 39 IKSVAVIGGGTMGRGIAIAFCLSGFETYLVEVNNKAAEFCKNELEITYKR-EKAFRRLND 97
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
+ EK + + TD + + + DL+VEA+ E++++K +LF +LD + IF +
Sbjct: 98 SKVEKLRKN----LQITTDFQKLN-NCDLIVEAVFEDMKLKKELFTKLDKICKPSCIFGT 152
Query: 559 NTSSLSINEIASV 597
NTSSL +NE++SV
Sbjct: 153 NTSSLDLNEMSSV 165
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 66.1 bits (154), Expect = 2e-11
Identities = 45/133 (33%), Positives = 75/133 (56%)
Frame = +1
Query: 199 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 378
+ +V +IGGG MG +A AG LV V N+ K + + + K++ N
Sbjct: 39 VNSVAIIGGGTMGKAMAICFGLAGIETFLV-VRNEQRCKQELEVMYAREKSFKRL---ND 94
Query: 379 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIFAS 558
+ EK +N +L +D + S + DL+VE+++E++++K +LF L+ + S IF +
Sbjct: 95 KRIEK-INANL---KITSDFHKLS-NCDLIVESVIEDMKLKKELFANLENICKSTCIFGT 149
Query: 559 NTSSLSINEIASV 597
NTSSL +NEI+SV
Sbjct: 150 NTSSLDLNEISSV 162
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 30.7 bits (66), Expect = 0.83
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 135 ENDAV*SYRKKFFKF-LCNAKCYQECNGYWRWSNGLRHSPGICPSR-TECY 281
EN+ + FF+ + K +Q C+G W ++GL SP +C SR C+
Sbjct: 1123 ENNCHNNGESNFFQCSMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCF 1173
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 361 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVEN 489
+Y D+PQ+ ++ LGRI+ AA K+ D+ I+++
Sbjct: 204 IYIDDPQDSKRISGKELGRIHKNKSAAHLDKNGDIPYWKIIKS 246
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 202 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD--VSNDALAKAKKSIGTNLSRV 351
KNV ++G G G I AQ +VTL+ + L ++ + + TN+ V
Sbjct: 171 KNVVIVGAGPSGIDITLQIAQTANHVTLISKKATYPVLPESVQQMATNVKSV 222
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 130 DSKMMQFKVIVRNFSSSSAMQS-AIKNVTVIGGGLMGSGIAQV 255
+S + I R F ++S + + + K VT+IG G GS IA++
Sbjct: 11 NSSRLSLSSIFRYFGTTSTIATMSPKKVTIIGSGNWGSAIARI 53
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +1
Query: 283 LVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSA 459
L+D N+ IG +R K M NP G+ ++ G A EA+K A
Sbjct: 17 LIDSPNEQHDPLTNFIGNEFARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEA 75
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/106 (27%), Positives = 47/106 (44%)
Frame = +1
Query: 235 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLG 414
G+ Q++A Q +L+ +S +A AK + S ++ V K + V+ S G
Sbjct: 681 GAQHGQITAYPRQLESLIRLS-EAHAKIRLSQEVSVDDVEKAFTLWREALKQSAVDPSTG 739
Query: 415 RINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIF 552
R++ A A+ S S VEA+ E + K K G S +F
Sbjct: 740 RVDVAILASGMSASGRKAVEAMCEAV---LKQLKTAKGFVTSKALF 782
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 205 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 327
+V +IGGG G+G+A + G LV++ + + + +S
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 205 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 327
+V +IGGG G+G+A + G LV++ + + + +S
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 205 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAK 315
+V VIGGG G A +A+ G N LV + + + +
Sbjct: 18 DVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIGE 54
>AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical
protein F56C3.1 protein.
Length = 286
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 248 PRYLPKQDRMLPWLTSAMMLWLKPRRALAQ 337
PR LPKQD+ TS +M + P+ +AQ
Sbjct: 230 PRLLPKQDQQSSVGTSEVMSPMPPKNTMAQ 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,352,855
Number of Sequences: 27780
Number of extensions: 246364
Number of successful extensions: 657
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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