Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11n03f
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    24   0.99 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.0  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 148 FKVIVRNFSSSSAMQSAIKNVTVIGGGLM-GSGIAQVSAQAGQNVTLVDV 294
           FKV+V     S     A+KN+   G G + G G+   +  A   + L+++
Sbjct: 188 FKVVVVEDVDSVECCGALKNIVACGAGFIDGLGLGDNTKAAVMRLGLMEI 237


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 207 CNGYWRW 227
           CNG WRW
Sbjct: 55  CNGLWRW 61


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 207 CNGYWRW 227
           CNG WRW
Sbjct: 93  CNGLWRW 99


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 322 KSIGTNLSRVAKKMYKDNPQE 384
           +SI  N + + KK+ +DNP E
Sbjct: 588 RSITRNATALIKKLCRDNPAE 608


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = -3

Query: 351 DPAEVCANALLGFSQSIIADVNQGNILSCLGRYLGYAGAH*TTSNNRYILDSTLHCRGT* 172
           D   +C +++    ++     N+ N  SCLG    Y   H T    +YI +S+ + +   
Sbjct: 353 DSCCLCLDSMNAVIRNFNESENRRN--SCLGSTETYYSKHNTQQFTQYIPESSSNLQEKT 410

Query: 171 KI 166
           KI
Sbjct: 411 KI 412


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,491
Number of Sequences: 438
Number of extensions: 2878
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)