Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m24r
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    30   3.9  
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA...    30   3.9  

>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
            protein protein.
          Length = 2895

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = -2

Query: 744  TXEVCLCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKCIKRVCTKLV*SFSLAGK 571
            T  +C C  C  +  +G  CK+  K    T    C E  KC   +   L   F+L  K
Sbjct: 1235 TGSLCCCTECARVCHKGHDCKL--KRTAPTAYCDCWEKCKCKALIAGNLTKRFALLCK 1290


>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
            protein.
          Length = 2885

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = -2

Query: 744  TXEVCLCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKCIKRVCTKLV*SFSLAGK 571
            T  +C C  C  +  +G  CK+  K    T    C E  KC   +   L   F+L  K
Sbjct: 1242 TGSLCCCTECARVCHKGHDCKL--KRTAPTAYCDCWEKCKCKALIAGNLTKRFALLCK 1297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,956,136
Number of Sequences: 53049
Number of extensions: 568378
Number of successful extensions: 1251
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)