Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m24f
(595 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 1.4
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 3.2
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 24 4.3
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 5.6
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 5.6
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 5.6
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 5.6
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 5.6
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 5.6
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 23 9.8
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 23 9.8
AJ304411-1|CAC39104.1| 187|Anopheles gambiae LDL receptor protein. 23 9.8
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 9.8
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.4 bits (53), Expect = 1.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 439 RTQIIFRTGRDRSIASLYFPANENDYTSLVQTLLMHLRGS 320
R + + G+ A L A EN+ Q +L HLRGS
Sbjct: 353 RLEKAIKVGKRAEFAKLIDIAEENELGVGYQVVLSHLRGS 392
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.2 bits (50), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 180 CPKNTEHRA-RHAGKCACCPACVTLLGEGA 266
C + E++ RH G C CPAC L+ + A
Sbjct: 1016 CDRCKENKYDRHQG-CLDCPACYNLVQDAA 1044
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.8 bits (49), Expect = 4.3
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +3
Query: 81 IMLVACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGE 260
I+LVA VA A+ DY ++ C+ +RA + A CP L
Sbjct: 4 IVLVALVAGCLLVAVAAQADYIQQEQCV--------TASNRAGYCTTKAECPDQEQLDLR 55
Query: 261 GATC 272
ATC
Sbjct: 56 AATC 59
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 63 MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
+ TL + LVA V S ++G L+ C + + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 63 MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
+ TL + LVA V S ++G L+ C + + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.4 bits (48), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 63 MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
+ TL + LVA V S ++G L+ C + + PP+V P
Sbjct: 530 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 570
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 365 LHKLSANSFDAFERLLTHSG 306
LH LSA S D F+R + SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 365 LHKLSANSFDAFERLLTHSG 306
LH LSA S D F+R + SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 365 LHKLSANSFDAFERLLTHSG 306
LH LSA S D F+R + SG
Sbjct: 254 LHLLSALSRDLFQRAILQSG 273
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 22.6 bits (46), Expect = 9.8
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 165 QPPLVCPKNTEHRARHAGKCACCPACVTLLG 257
+PPL P + A C C V LLG
Sbjct: 172 EPPLADPNSMHLFALTLSVCLCVGGLVVLLG 202
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 213 AGKCACCPACVTLLGEG 263
AG +CCPA L G G
Sbjct: 19 AGTSSCCPAGTGLNGSG 35
>AJ304411-1|CAC39104.1| 187|Anopheles gambiae LDL receptor protein.
Length = 187
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 222 CACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 335
CAC P + L G TCK + +L S VC +C
Sbjct: 24 CAC-PIGIQLKDNGKTCKSWPLQL----SGVCCTVPRC 56
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 22.6 bits (46), Expect = 9.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 418 TGRDRSIASLYFPANENDYTSLVQTLLMHLRGS 320
TG+ + N N Y S Q + HLRGS
Sbjct: 358 TGKGQLFQQQIDEVNANVYGSGYQVVTSHLRGS 390
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,256
Number of Sequences: 2352
Number of extensions: 13703
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -