Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m21r
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.75 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -1

Query: 228 YYYINRILLSFNLMFY*IYLRLIFKNV*WYSFFQFAHDIFVL 103
           Y+Y   I+ + +L+FY + + L+     +Y+F  F   + +L
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLL 255


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   FYAIEQFXKIYVSFTKFKLLLQTRKNVWF 87
           FY +     + V + +F +LL   KN+ F
Sbjct: 94  FYVVTTVLVVLVGYERFDILLNKSKNLQF 122


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   FYAIEQFXKIYVSFTKFKLLLQTRKNVWF 87
           FY +     + V + +F +LL   KN+ F
Sbjct: 94  FYVVTTVLVVLVGYERFDILLNKSKNLQF 122


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   FYAIEQFXKIYVSFTKFKLLLQTRKNVWF 87
           FY +     + V + +F +LL   KN+ F
Sbjct: 94  FYVVTTVLVVLVGYERFDILLNKSKNLQF 122


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 427 LISTPYNYNSNIVVDELCR 371
           LI+  YN+N N +  +LC+
Sbjct: 419 LITPFYNFNENTIHSKLCK 437


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 364 DPNDTIHPQRYCCCNYKVLKSIKPV 438
           DP   + P  + C NY  L  + P+
Sbjct: 159 DPGPALPPTGFLCNNYPPLPQVPPL 183


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 364 DPNDTIHPQRYCCCNYKVLKSIKPV 438
           DP   + P  + C NY  L  + P+
Sbjct: 159 DPGPALPPAGFLCNNYLPLPQVPPL 183


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 217 NIIILNKFKLFT*DNSLKISSRGKKCTETIITMYFDL 327
           N I +   +LF  DN+L  +  G   +   I + FDL
Sbjct: 337 NKIEITACRLFNIDNALLFAICGSAFSYLFIMLQFDL 373


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 1   FYAIEQFXKIYVSFTKFKL 57
           FY  EQF  ++V FT   L
Sbjct: 44  FYKTEQFTVLWVLFTMIVL 62


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +1

Query: 361  GDPNDTIHPQ 390
            GDP+DT++P+
Sbjct: 1476 GDPSDTLNPR 1485


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,099
Number of Sequences: 336
Number of extensions: 3591
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)