Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m21r
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.0  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   6.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 458 TICHFIDDTLFCWLEYVNDRIASIA*GLHDFV 553
           T  +F DD++   L Y  DR+A I    H F+
Sbjct: 605 TSINFSDDSMID-LSYSEDRLADITVATHQFI 635


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 394 YCCCNYKVLKSIKPVIASSS*HYLPFYR*HSFLL 495
           YC   Y   +S  P+I +   H+L  Y  H F L
Sbjct: 746 YCKLMYNRERSYIPLIEAEPKHFLCSYNTHCFAL 779


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 664 RLLLLCGLYIAVVAAAFPSETRNIEKRDVMESMKNAWNEVVKTLSDAGDAV 512
           R+L L G  + ++     +   N+E+ D+  +  +AWN+ + T + A  +V
Sbjct: 183 RVLNLRGNILRMLQRESFANLTNLEQLDLSYNYISAWNQQILTTTTALQSV 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,175
Number of Sequences: 2352
Number of extensions: 13031
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)