Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m18f
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    28   0.051
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.090
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.090
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.48 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.84 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 0.051
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -1

Query: 563 LEMLVCCLFFSLKLVFYVLDPHLLEY--AGYFDSDSHILLQSSKWTEIFLGATTPHFGQL 390
           LE LV C++ +   V   L   ++        D+D   +  +S W +++LG T    G +
Sbjct: 28  LEKLVPCVYLTSFSVVLSLGSFIVSVYLTTKIDNDGESISLASGWLDLYLGITIQTLG-I 86

Query: 389 IFNLLHSLYVQLF 351
           I N +++  + +F
Sbjct: 87  ISNCINAKQITIF 99


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 0.090
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +2

Query: 2   KIYFDVGIQILQFTNWSENTIHYKIKINSTS*LKIYFRNAVNESGXXXXXXXXNVWG*YR 181
           K Y DV + I QFT  S       IK+N++   K  ++ AV + G          W    
Sbjct: 163 KPYIDVVVPITQFTLLSIGETAMGIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIHNE 222

Query: 182 KIWGLFPWPR 211
            I+ L P  R
Sbjct: 223 TIYSLTPQGR 232


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 0.090
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +2

Query: 2   KIYFDVGIQILQFTNWSENTIHYKIKINSTS*LKIYFRNAVNESGXXXXXXXXNVWG*YR 181
           K Y DV + I QFT  S       IK+N++   K  ++ AV + G          W    
Sbjct: 163 KPYIDVVVPITQFTLLSIGETAMGIKLNASDNDKDGYKRAVYKIGQLLTYRAPRPWIYNE 222

Query: 182 KIWGLFPWPR 211
            I+ L P  R
Sbjct: 223 TIYSLTPQGR 232


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -1

Query: 572 LFTLEMLVCC--LFFSLKLVF 516
           +FT+ +L CC  +FF++ L+F
Sbjct: 175 IFTMHLLFCCAFIFFNMHLLF 195



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/40 (22%), Positives = 17/40 (42%)
 Frame = -1

Query: 572 LFTLEMLVCCLFFSLKLVFYVLDPHLLEYAGYFDSDSHIL 453
           +FT+ +L     +     F +   HLL    +   + H+L
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLL 194


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = -2

Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILI 458
           +S+   W    S ++   F+F I+  +++ +TSIL+++
Sbjct: 58  WSIFNKWNQFRSYSNFSVFLFDIITIVTLTSTSILLIV 95


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 257 IVGVRLVSFLSARVPVW 207
           IVG RLV+FL+  V  W
Sbjct: 650 IVGFRLVAFLALLVKTW 666


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 257 IVGVRLVSFLSARVPVW 207
           IVG RLV+FL+  V  W
Sbjct: 650 IVGFRLVAFLALLVKTW 666


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 8   YFDVGIQILQFTNWSENTIHYKI 76
           +F++ + I  F N++ENTIH K+
Sbjct: 414 FFNIFL-ITPFYNFNENTIHSKL 435


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 30  FCNLLIGAKTQFITKL 77
           FCN  +G + QFI KL
Sbjct: 108 FCNRDLGREKQFIVKL 123


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 30  FCNLLIGAKTQFITKL 77
           FCN  +G + QFI KL
Sbjct: 108 FCNRDLGREKQFIVKL 123


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 30  FCNLLIGAKTQFITKL 77
           FCN  +G + QFI KL
Sbjct: 108 FCNRDLGREKQFIVKL 123


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 30  FCNLLIGAKTQFITKL 77
           FCN  +G + QFI KL
Sbjct: 108 FCNRDLGREKQFIVKL 123


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +3

Query: 306 LDNLAKLERQFTVLREQLYVER 371
           L+N+ K+++  T L ++ Y+E+
Sbjct: 102 LENMTKIDKDLTELGQKKYLEK 123


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +3

Query: 306 LDNLAKLERQFTVLREQLYVER 371
           L+N+ K+++  T L ++ Y+E+
Sbjct: 102 LENMTKIDKDLTELGQKKYLEK 123


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 430  RYSWERPPLTSAS 392
            R SW  PPLT+A+
Sbjct: 1118 RVSWVSPPLTAAN 1130


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 24  FKFCNLLIGAKTQFITKLK-LILLH 95
           FK  NL+I  +  F  K+K ++LLH
Sbjct: 61  FKLINLIIKQEEFFSPKIKRMVLLH 85


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 448 SLRSGPRYSWERPPLTSAS 392
           ++ + PR  W RPP T ++
Sbjct: 403 TISTTPRPEWARPPSTPSA 421


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 21  VFKFCNLLIGAKTQFITKLKLILLH 95
           +F  C LLI   T  +  +  +++H
Sbjct: 420 IFVLCELLIEGTTSILINVPSLIIH 444


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  DVGIQILQFTNWSEN 58
           D G+ ILQ  NW  N
Sbjct: 373 DTGLTILQVNNWFIN 387


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 534 EEQAAHQHFKSEKWLAYEN 590
           +EQ     +K  +W+ Y+N
Sbjct: 321 DEQKTPYMYKGNQWVGYDN 339


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAE 401
           +R++E  +NL   ERQ  +  +    +  KQ + ++ E
Sbjct: 185 KRKSELAENLGLSERQIKIWFQNRRAKERKQNKKRIEE 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,235
Number of Sequences: 336
Number of extensions: 2534
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)