Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m18f
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006250-1|AAH06250.2| 323|Homo sapiens breast cancer metastasi... 116 5e-26
AY827074-1|AAV83797.1| 323|Homo sapiens BRMS1-like protein p40 ... 116 5e-26
CR457173-1|CAG33454.1| 246|Homo sapiens BRMS1 protein. 96 7e-20
BC009834-1|AAH09834.1| 246|Homo sapiens breast cancer metastasi... 96 7e-20
AF281036-1|AAK69131.1| 246|Homo sapiens breast cancer metastasi... 96 7e-20
AF159141-1|AAG00075.1| 246|Homo sapiens breast cancer metastasi... 96 7e-20
BC098404-1|AAH98404.1| 328|Homo sapiens suppressor of defective... 50 5e-06
AK024460-1|BAB15750.1| 368|Homo sapiens FLJ00052 protein protein. 50 5e-06
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 31 3.0
U03749-1|AAB53685.1| 457|Homo sapiens chromogranin A protein. 30 7.0
J03483-1|AAA52017.1| 457|Homo sapiens CHGA protein. 30 7.0
BT006869-1|AAP35515.1| 457|Homo sapiens chromogranin A (parathy... 30 7.0
BC009384-1|AAH09384.2| 404|Homo sapiens CHGA protein protein. 30 7.0
BC006459-1|AAH06459.1| 457|Homo sapiens chromogranin A (parathy... 30 7.0
BC001059-1|AAH01059.1| 457|Homo sapiens chromogranin A (parathy... 30 7.0
AK223381-1|BAD97101.1| 457|Homo sapiens chromogranin A variant ... 30 7.0
X85372-1|CAA59688.1| 86|Homo sapiens Sm protein F protein. 29 9.3
CR456751-1|CAG33032.1| 86|Homo sapiens SNRPF protein. 29 9.3
BC128453-1|AAI28454.1| 86|Homo sapiens small nuclear ribonucle... 29 9.3
BC128452-1|AAI28453.1| 86|Homo sapiens small nuclear ribonucle... 29 9.3
BC095412-1|AAH95412.1| 322|Homo sapiens MYADM protein protein. 29 9.3
BC063397-1|AAH63397.2| 86|Homo sapiens SNRPF protein protein. 29 9.3
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 29 9.3
BC013995-1|AAH13995.1| 322|Homo sapiens myeloid-associated diff... 29 9.3
BC002505-1|AAH02505.3| 86|Homo sapiens small nuclear ribonucle... 29 9.3
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 29 9.3
AY358582-1|AAQ88945.1| 322|Homo sapiens PVTV553 protein. 29 9.3
AK075276-1|BAC11513.1| 322|Homo sapiens protein ( Homo sapiens ... 29 9.3
AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens ... 29 9.3
AF087882-1|AAP97182.1| 298|Homo sapiens myeloid upregulated pro... 29 9.3
>BC006250-1|AAH06250.2| 323|Homo sapiens breast cancer
metastasis-suppressor 1-like protein.
Length = 323
Score = 116 bits (280), Expect = 5e-26
Identities = 54/100 (54%), Positives = 77/100 (77%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR ECLD ++ LE+QFT L++QLY ER+ QV+ +L EV G++ EYL PL LQENM+I
Sbjct: 56 RRRMECLDEMSNLEKQFTDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQI 115
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
R +VAGI +++ +E++K+K+E E QA+ QH +SEK L Y+
Sbjct: 116 RTKVAGIYRELCLESVKNKYECEIQASRQHCESEKLLLYD 155
>AY827074-1|AAV83797.1| 323|Homo sapiens BRMS1-like protein p40
protein.
Length = 323
Score = 116 bits (280), Expect = 5e-26
Identities = 54/100 (54%), Positives = 77/100 (77%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR ECLD ++ LE+QFT L++QLY ER+ QV+ +L EV G++ EYL PL LQENM+I
Sbjct: 56 RRRMECLDEMSNLEKQFTDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQI 115
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
R +VAGI +++ +E++K+K+E E QA+ QH +SEK L Y+
Sbjct: 116 RTKVAGIYRELCLESVKNKYECEIQASRQHCESEKLLLYD 155
>CR457173-1|CAG33454.1| 246|Homo sapiens BRMS1 protein.
Length = 246
Score = 96.3 bits (229), Expect = 7e-20
Identities = 46/100 (46%), Positives = 69/100 (69%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR+EC+ + LE+QF+ L+E+L+ ER+ Q+ +L EV R+ EY PL LQ +++I
Sbjct: 55 RRRSECVSEMLDLEKQFSELKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKI 114
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
RI+VAGI K ++ I++K+E E Q A QH +SEK L Y+
Sbjct: 115 RIQVAGIYKGFCLDVIRNKYECELQGAKQHLESEKLLLYD 154
>BC009834-1|AAH09834.1| 246|Homo sapiens breast cancer metastasis
suppressor 1 protein.
Length = 246
Score = 96.3 bits (229), Expect = 7e-20
Identities = 46/100 (46%), Positives = 69/100 (69%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR+EC+ + LE+QF+ L+E+L+ ER+ Q+ +L EV R+ EY PL LQ +++I
Sbjct: 55 RRRSECVSEMLDLEKQFSELKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKI 114
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
RI+VAGI K ++ I++K+E E Q A QH +SEK L Y+
Sbjct: 115 RIQVAGIYKGFCLDVIRNKYECELQGAKQHLESEKLLLYD 154
>AF281036-1|AAK69131.1| 246|Homo sapiens breast cancer
metastasis-suppressor 1 protein.
Length = 246
Score = 96.3 bits (229), Expect = 7e-20
Identities = 46/100 (46%), Positives = 69/100 (69%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR+EC+ + LE+QF+ L+E+L+ ER+ Q+ +L EV R+ EY PL LQ +++I
Sbjct: 55 RRRSECVSEMLDLEKQFSELKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKI 114
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
RI+VAGI K ++ I++K+E E Q A QH +SEK L Y+
Sbjct: 115 RIQVAGIYKGFCLDVIRNKYECELQGAKQHLESEKLLLYD 154
>AF159141-1|AAG00075.1| 246|Homo sapiens breast cancer
metastasis-suppressor 1 protein.
Length = 246
Score = 96.3 bits (229), Expect = 7e-20
Identities = 46/100 (46%), Positives = 69/100 (69%)
Frame = +3
Query: 288 RRRNECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRI 467
RRR+EC+ + LE+QF+ L+E+L+ ER+ Q+ +L EV R+ EY PL LQ +++I
Sbjct: 55 RRRSECVSEMLDLEKQFSELKEKLFRERLSQLRLRLEEVGAERAPEYTEPLGGLQRSLKI 114
Query: 468 RIEVAGILKQMRIENIKHKFEAEEQAAHQHFKSEKWLAYE 587
RI+VAGI K ++ I++K+E E Q A QH +SEK L Y+
Sbjct: 115 RIQVAGIYKGFCLDVIRNKYECELQGAKQHLESEKLLLYD 154
>BC098404-1|AAH98404.1| 328|Homo sapiens suppressor of defective
silencing 3 homolog (S. cerevisiae) protein.
Length = 328
Score = 50.4 bits (115), Expect = 5e-06
Identities = 23/88 (26%), Positives = 50/88 (56%)
Frame = +3
Query: 327 ERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRIRIEVAGILKQMRI 506
E + ++EQ+Y +++ ++ QL +++ G QEY +++L + + RI A + Q+
Sbjct: 62 EEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLET 121
Query: 507 ENIKHKFEAEEQAAHQHFKSEKWLAYEN 590
E ++ + E++AA + F+ +K EN
Sbjct: 122 EQVERNYIKEKKAAVKEFEDKKVELKEN 149
>AK024460-1|BAB15750.1| 368|Homo sapiens FLJ00052 protein protein.
Length = 368
Score = 50.4 bits (115), Expect = 5e-06
Identities = 23/88 (26%), Positives = 50/88 (56%)
Frame = +3
Query: 327 ERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRIRIEVAGILKQMRI 506
E + ++EQ+Y +++ ++ QL +++ G QEY +++L + + RI A + Q+
Sbjct: 102 EEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLET 161
Query: 507 ENIKHKFEAEEQAAHQHFKSEKWLAYEN 590
E ++ + E++AA + F+ +K EN
Sbjct: 162 EQVERNYIKEKKAAVKEFEDKKVELKEN 189
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 31.1 bits (67), Expect = 3.0
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Frame = +3
Query: 309 DNLAKLERQFTVLREQLY--VERVKQVEYQLAEVRGGRSQEYLGPLRRLQENMRIRIEVA 482
D AKL ++ TVL E+L ++ +Q A V+ QE L + + ++ +R ++
Sbjct: 1604 DREAKLRKKVTVLEEKLVSSSNAMENASHQ-ASVQVESLQEQLNVVSKQRDETALRFCLS 1662
Query: 483 GILKQMR-----IENIKHKFEAEEQAAHQ-HFKSEKWLAYE 587
G +KQ R ++ + F+ EE+A + + +K L E
Sbjct: 1663 GTVKQYRLSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAE 1703
>U03749-1|AAB53685.1| 457|Homo sapiens chromogranin A protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>J03483-1|AAA52017.1| 457|Homo sapiens CHGA protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>BT006869-1|AAP35515.1| 457|Homo sapiens chromogranin A
(parathyroid secretory protein 1) protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>BC009384-1|AAH09384.2| 404|Homo sapiens CHGA protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 2 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 61
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 62 AELKEAVEEPSSKDVMEKREDSKEA 86
>BC006459-1|AAH06459.1| 457|Homo sapiens chromogranin A
(parathyroid secretory protein 1) protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>BC001059-1|AAH01059.1| 457|Homo sapiens chromogranin A
(parathyroid secretory protein 1) protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>AK223381-1|BAD97101.1| 457|Homo sapiens chromogranin A variant
protein.
Length = 457
Score = 29.9 bits (64), Expect = 7.0
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 300 ECLDNLAKLERQFTVLREQLYVERVKQVEYQLAEVRGGRSQEYLG---PLRRLQENMRIR 470
EC + L ER ++LR Q ++ ++ + Q A+ R + +++ G L + EN +
Sbjct: 55 ECFETLRGDERILSILRHQNLLKELQDLALQGAKERAHQQKKHSGFEDELSEVLENQSSQ 114
Query: 471 IEVAGILKQMRIENIKHKFEAEEQA 545
E+ +++ +++ K E ++A
Sbjct: 115 AELKEAVEEPSSKDVMEKREDSKEA 139
>X85372-1|CAA59688.1| 86|Homo sapiens Sm protein F protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>CR456751-1|CAG33032.1| 86|Homo sapiens SNRPF protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>BC128453-1|AAI28454.1| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>BC128452-1|AAI28453.1| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>BC095412-1|AAH95412.1| 322|Homo sapiens MYADM protein protein.
Length = 322
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILIFSCSLRSGPRYSWERPPLTSAS 392
FSL+ A S N MF+ C S+ T I++++ C L++ SW P+T A
Sbjct: 51 FSLVASVGAWTGSMGNWS-MFTWCFCFSV--TLIILIVELCGLQARFPLSWRNFPITFAC 107
Query: 391 *YSTCFTLS 365
Y+ F LS
Sbjct: 108 -YAALFCLS 115
>BC063397-1|AAH63397.2| 86|Homo sapiens SNRPF protein protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 389 STGRSEGWSLPGISRSTSKTAGEYENQNRSSRHTQANEDR 508
S+ RS +S G SRS S+++ +RSSRH+ + R
Sbjct: 557 SSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSR 596
>BC013995-1|AAH13995.1| 322|Homo sapiens myeloid-associated
differentiation marker protein.
Length = 322
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILIFSCSLRSGPRYSWERPPLTSAS 392
FSL+ A S N MF+ C S+ T I++++ C L++ SW P+T A
Sbjct: 51 FSLVASVGAWTGSMGNWS-MFTWCFCFSV--TLIILIVELCGLQARFPLSWRNFPITFAC 107
Query: 391 *YSTCFTLS 365
Y+ F LS
Sbjct: 108 -YAALFCLS 115
>BC002505-1|AAH02505.3| 86|Homo sapiens small nuclear
ribonucleoprotein polypeptide F protein.
Length = 86
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 494 LEYAGYFDS-DSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSKHSE 336
+EY GY S D ++ +Q + E GA + H G+++ + LY++ + E
Sbjct: 27 MEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 389 STGRSEGWSLPGISRSTSKTAGEYENQNRSSRHTQANEDR 508
S+ RS +S G SRS S+++ +RSSRH+ + R
Sbjct: 322 SSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSR 361
>AY358582-1|AAQ88945.1| 322|Homo sapiens PVTV553 protein.
Length = 322
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILIFSCSLRSGPRYSWERPPLTSAS 392
FSL+ A S N MF+ C S+ T I++++ C L++ SW P+T A
Sbjct: 51 FSLVASVGAWTGSMGNWS-MFTWCFCFSV--TLIILIVELCGLQARFPLSWRNFPITFAC 107
Query: 391 *YSTCFTLS 365
Y+ F LS
Sbjct: 108 -YAALFCLS 115
>AK075276-1|BAC11513.1| 322|Homo sapiens protein ( Homo sapiens
cDNA FLJ90795 fis, clone THYRO1001702, highly similar to
Myeloid-associated differentiation marker. ).
Length = 322
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILIFSCSLRSGPRYSWERPPLTSAS 392
FSL+ A S N MF+ C S+ T I++++ C L++ SW P+T A
Sbjct: 51 FSLVASVGAWTGSMGNWS-MFTWCFCFSV--TLIILIVELCGLQARFPLSWRNFPITFAC 107
Query: 391 *YSTCFTLS 365
Y+ F LS
Sbjct: 108 -YAALFCLS 115
>AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens
cDNA FLJ32070 fis, clone OCBBF1000119. ).
Length = 757
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 389 STGRSEGWSLPGISRSTSKTAGEYENQNRSSRHTQANEDR 508
S+ RS +S G SRS S+++ +RSSRH+ + R
Sbjct: 525 SSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSR 564
>AF087882-1|AAP97182.1| 298|Homo sapiens myeloid upregulated
protein protein.
Length = 298
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 571 FSLLKCWCAACSSASNLCFMFSILICLSMPATSILILIFSCSLRSGPRYSWERPPLTSAS 392
FSL+ A S N MF+ C S+ T I++++ C L++ SW P+T A
Sbjct: 51 FSLVASVGAWTGSMGNWS-MFTWCFCFSV--TLIILIVELCGLQARFPLSWRNFPITFAC 107
Query: 391 *YSTCFTLS 365
Y+ F LS
Sbjct: 108 -YAALFCLS 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,374,862
Number of Sequences: 237096
Number of extensions: 1476874
Number of successful extensions: 8116
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8114
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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