Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m18f
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 1.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 2.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 5.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 6.8
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 21 6.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 6.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 6.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 6.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 6.8
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 9.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.0
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 575 PLFTLEMLVCCLFFSLKLVF 516
P F L L C LFF + +VF
Sbjct: 201 PEFPLYQLSCILFFLIPMVF 220
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 410 TPHFGQLIFNLLHSLYVQLF 351
T H G LIF+ S Y+ LF
Sbjct: 201 TEHLGYLIFSSTISFYLPLF 220
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 354 QLYVERVKQVEYQLAEVRG 410
++ +ER+KQV QL + RG
Sbjct: 495 RINIERMKQVYQQLNKYRG 513
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 153 LHHYRLPLSLTALRK 109
+ HY L +LTALRK
Sbjct: 459 ISHYHLYTNLTALRK 473
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 425 ISRSTSKTAGEYENQNRSSRHTQANED 505
I++S +TAG + SR+ +ED
Sbjct: 336 ITQSNKRTAGNLATREHPSRNFTMSED 362
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 318 LSYRDIRFCVSHTRL 274
+S +DIR+C+ H L
Sbjct: 32 VSMKDIRYCIIHMGL 46
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 40 SRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 40 SRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 40 SRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 40 SRSREREKKSYKNENSYRKYRETSKERSRDRK 71
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 40 SRSREREQKSYKNENSYRKYRETSKERSRDRK 71
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 273 SRSREREQKSYKNENSYRKYRETSKERSRDRK 304
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 6.8
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDREH-KTQ 523
SRS + Y+N+N ++ + +++R KT+
Sbjct: 278 SRSREREQKSYKNENSYRKYRETSKERSRDKTE 310
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 428 SRSTSKTAGEYENQN--RSSRHTQANEDREHK 517
SRS + Y+N+N R R T R+ K
Sbjct: 273 SRSREREKKSYKNENSYRKYRETSKERSRDRK 304
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 9.0
Identities = 14/68 (20%), Positives = 26/68 (38%)
Frame = -1
Query: 524 LVFYVLDPHLLEYAGYFDSDSHILLQSSKWTEIFLGATTPHFGQLIFNLLHSLYVQLFSK 345
L+F ++L+ Y+D + IL TE L + ++ + Y
Sbjct: 158 LIFESWTHNVLDMVLYWDQEPIILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHFAGN 217
Query: 344 HSELSLKF 321
S +S+ F
Sbjct: 218 FSSISITF 225
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 40 SRSREREQKSYKNENSYRKYRETSKER 66
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 273 SRSREREQRSYKNENSYRKYRETSKER 299
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 262 SRSREREQKSYKNENSYRKYRETSKER 288
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 273 SRSREREQKSYKNENSYRKYRETSKER 299
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 273 SRSREREQKSYKNENSYRKYRETSKER 299
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 262 SRSREREQKSYKNENSYRKYRETSKER 288
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 273 SRSREREQKSYKNENSYRKYRETSKER 299
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +2
Query: 428 SRSTSKTAGEYENQNRSSRHTQANEDR 508
SRS + Y+N+N ++ + +++R
Sbjct: 273 SRSREREQKSYKNENSYRKYRETSKER 299
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -2
Query: 556 CWCAACSSASNLCF 515
C C C+S + CF
Sbjct: 435 CECKTCNSKTKCCF 448
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,002
Number of Sequences: 438
Number of extensions: 2926
Number of successful extensions: 32
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -