Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m14f
         (621 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z85996-5|CAD92810.1|  593|Homo sapiens RP3-431A14.5 protein.           33   1.1  
AB046819-1|BAB13425.1|  608|Homo sapiens KIAA1599 protein protein.     33   1.1  

>Z85996-5|CAD92810.1|  593|Homo sapiens RP3-431A14.5 protein.
          Length = 593

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
 Frame = +3

Query: 294 VVYLGGQDGIYKFNHATKSAKNLRITNYSIRQMFHSPTHGLFFTTFNPEEKAFVYSYGQV 473
           V Y   +DG +   H T+  KN   T   + Q F  P   L    ++   K  VY + + 
Sbjct: 202 VFYRSNEDGTFTICHKTEVMKN---TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRD 258

Query: 474 G--DIVPELTDIKTSLIADSKKYNIY 545
           G  D + E T     L     ++NIY
Sbjct: 259 GSHDFIGEFTTSYRELARGQSQFNIY 284


>AB046819-1|BAB13425.1|  608|Homo sapiens KIAA1599 protein protein.
          Length = 608

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
 Frame = +3

Query: 294 VVYLGGQDGIYKFNHATKSAKNLRITNYSIRQMFHSPTHGLFFTTFNPEEKAFVYSYGQV 473
           V Y   +DG +   H T+  KN   T   + Q F  P   L    ++   K  VY + + 
Sbjct: 217 VFYRSNEDGTFTICHKTEVMKN---TLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRD 273

Query: 474 G--DIVPELTDIKTSLIADSKKYNIY 545
           G  D + E T     L     ++NIY
Sbjct: 274 GSHDFIGEFTTSYRELARGQSQFNIY 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,062,597
Number of Sequences: 237096
Number of extensions: 1773993
Number of successful extensions: 3241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)