Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m12f
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007672-1|AAH07672.1| 179|Homo sapiens NADH dehydrogenase (ubi... 124 2e-28
AF261090-1|AAF99683.1| 179|Homo sapiens NADH-ubiquinone dehydro... 124 2e-28
AF044956-1|AAD42057.1| 179|Homo sapiens NADH:ubiquinone oxidore... 124 2e-28
S82655-1|AAB46797.2| 102|Homo sapiens NADH-ubiquinone oxidoredu... 68 2e-11
BC022504-1|AAH22504.1| 622|Homo sapiens RGS9 protein protein. 34 0.34
AY585191-1|AAT79494.1| 671|Homo sapiens regulator of G-protein ... 34 0.34
AF071476-1|AAC64040.1| 674|Homo sapiens regulator of G-protein ... 34 0.34
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 33 0.59
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 33 0.59
AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein. 33 0.59
AF178072-1|AAG09312.1| 671|Homo sapiens RGS9 isoform 2 protein. 33 0.59
AF178070-1|AAG09311.1| 484|Homo sapiens RGS9 isoform 1 protein. 33 0.59
AF493933-1|AAM12647.1| 674|Homo sapiens regulator of G protein ... 32 1.4
BC127016-1|AAI27017.1| 259|Homo sapiens KRTAP10-8 protein protein. 29 7.3
AB076355-1|BAD01542.1| 259|Homo sapiens keratin associated prot... 29 7.3
U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid... 29 9.7
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein. 29 9.7
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 29 9.7
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein. 29 9.7
BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein. 29 9.7
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM... 29 9.7
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 29 9.7
>BC007672-1|AAH07672.1| 179|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 9, 22kDa protein.
Length = 179
Score = 124 bits (299), Expect = 2e-28
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +3
Query: 69 THAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKANXXXXXXXXX 248
TH QKV LYKRALR+LE++ +R YRY A L+R RF++H E +M KA
Sbjct: 11 THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70
Query: 249 XXXXQHPIPKYFATSPGGVAHER--VVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFV 422
QHP P F SPGG ++ER P+W LD WHP EKA YP+YF KREQ KK
Sbjct: 71 FWYRQHPQPYIFPDSPGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKREQWKKLRR 130
Query: 423 AMWEKEYGKPDEK 461
WE+E + E+
Sbjct: 131 ESWEREVKQLQEE 143
>AF261090-1|AAF99683.1| 179|Homo sapiens NADH-ubiquinone
dehydrogenase 1 beta subcomplex protein.
Length = 179
Score = 124 bits (299), Expect = 2e-28
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +3
Query: 69 THAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKANXXXXXXXXX 248
TH QKV LYKRALR+LE++ +R YRY A L+R RF++H E +M KA
Sbjct: 11 THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70
Query: 249 XXXXQHPIPKYFATSPGGVAHER--VVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFV 422
QHP P F SPGG ++ER P+W LD WHP EKA YP+YF KREQ KK
Sbjct: 71 FWYRQHPQPYIFPDSPGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKREQWKKLRR 130
Query: 423 AMWEKEYGKPDEK 461
WE+E + E+
Sbjct: 131 ESWEREVKQLQEE 143
>AF044956-1|AAD42057.1| 179|Homo sapiens NADH:ubiquinone
oxidoreductase B22 subunit protein.
Length = 179
Score = 124 bits (299), Expect = 2e-28
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +3
Query: 69 THAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKANXXXXXXXXX 248
TH QKV LYKRALR+LE++ +R YRY A L+R RF++H E +M KA
Sbjct: 11 THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70
Query: 249 XXXXQHPIPKYFATSPGGVAHER--VVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFV 422
QHP P F SPGG ++ER P+W LD WHP EKA YP+YF KREQ KK
Sbjct: 71 FWYRQHPQPYIFPDSPGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKREQWKKLRR 130
Query: 423 AMWEKEYGKPDEK 461
WE+E + E+
Sbjct: 131 ESWEREVKQLQEE 143
>S82655-1|AAB46797.2| 102|Homo sapiens NADH-ubiquinone
oxidoreductase B22 subunit protein.
Length = 102
Score = 67.7 bits (158), Expect = 2e-11
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 273 PKYFATSPGGVAHERV--VTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKEYG 446
P F SPGG ++ER P+W LD WHP EKA YP+YF KREQ KK WE+E
Sbjct: 2 PYIFPDSPGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKREQWKKLRRESWEREVK 61
Query: 447 KPDEK 461
+ E+
Sbjct: 62 QLQEE 66
>BC022504-1|AAH22504.1| 622|Homo sapiens RGS9 protein protein.
Length = 622
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKE 440
PK P G + R TP W W P E Y Y KR +KK + +EKE
Sbjct: 40 PKNLILKPDGSLY-RFQTPYFWPTQQW-PAEDTDYAIYLAKRNIKKKGILEEYEKE 93
>AY585191-1|AAT79494.1| 671|Homo sapiens regulator of G-protein
signaling 9L protein.
Length = 671
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKE 440
PK P G + R TP W W P E Y Y KR +KK + +EKE
Sbjct: 89 PKNLILKPDGSLY-RFQTPYFWPTQQW-PAEDTDYAIYLAKRNIKKKGILEEYEKE 142
>AF071476-1|AAC64040.1| 674|Homo sapiens regulator of G-protein
signaling 9L protein.
Length = 674
Score = 33.9 bits (74), Expect = 0.34
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKE 440
PK P G + R TP W W P E Y Y KR +KK + +EKE
Sbjct: 89 PKNLILKPDGSLY-RFQTPYFWPTQQW-PAEDTDYAIYLAKRNIKKKGILEEYEKE 142
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH 473
E+ + E K+R++RK+E WE+E K DEKD+ H
Sbjct: 435 EREREHERDKERQRRKEE----WERERAKRDEKDRQH 467
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH 473
E+ + E K+R++RK+E WE+E K DEKD+ H
Sbjct: 200 ERERERERDKERQRRKEE----WERERAKRDEKDRQH 232
>AK122593-1|BAC56934.1| 229|Homo sapiens FLJ00419 protein protein.
Length = 229
Score = 33.1 bits (72), Expect = 0.59
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH 473
E+ + E K+R++RK+E WE+E K DEKD+ H
Sbjct: 108 ERERERERDKERQRRKEE----WERERAKRDEKDRQH 140
>AF178072-1|AAG09312.1| 671|Homo sapiens RGS9 isoform 2 protein.
Length = 671
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKE 440
PK P G + R TP W W P E Y Y KR +KK + +EKE
Sbjct: 89 PKNLILKPDGSLY-RFQTPYFWPTRQW-PAEDTDYAIYLAKRNIKKKGILEEYEKE 142
>AF178070-1|AAG09311.1| 484|Homo sapiens RGS9 isoform 1 protein.
Length = 484
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKE 440
PK P G + R TP W W P E Y Y KR +KK + +EKE
Sbjct: 89 PKNLILKPDGSLY-RFQTPYFWPTRQW-PAEDTDYAIYLAKRNIKKKGILEEYEKE 142
>AF493933-1|AAM12647.1| 674|Homo sapiens regulator of G protein
signalling 9L protein.
Length = 674
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +3
Query: 273 PKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEK 437
PK P G + R TP W W P E Y Y KR +KK + +EK
Sbjct: 89 PKNLILKPDGSLY-RFQTPYFWPTQQW-PAEDTDYAIYLAKRNIKKKGILEEYEK 141
>BC127016-1|AAI27017.1| 259|Homo sapiens KRTAP10-8 protein protein.
Length = 259
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 119 RSVLRPPTCVPIPSCIV 169
R V RP CVP+PSC V
Sbjct: 214 RPVCRPACCVPVPSCCV 230
>AB076355-1|BAD01542.1| 259|Homo sapiens keratin associated protein
protein.
Length = 259
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 119 RSVLRPPTCVPIPSCIV 169
R V RP CVP+PSC V
Sbjct: 214 RPVCRPACCVPVPSCCV 230
>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
rich nuclear protein isoform protein.
Length = 1021
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 804 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 838
>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
Length = 1284
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 1067 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 1101
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 913 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
Length = 1048
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 831 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 865
>BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein.
Length = 743
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 526 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 560
>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
protein.
Length = 1061
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 844 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 878
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 29.1 bits (62), Expect = 9.7
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 363 EKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDK 467
E+ EYF++ E+ ++EF +E+E G+ +E+++
Sbjct: 913 EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,030,312
Number of Sequences: 237096
Number of extensions: 1460752
Number of successful extensions: 4000
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3995
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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