Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m12f
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070784-1|AAL48406.1|  144|Drosophila melanogaster AT12494p pro...   188   3e-48
AE014134-2336|AAF53290.1|  144|Drosophila melanogaster CG9306-PA...   188   3e-48
AY061371-1|AAL28919.1|  244|Drosophila melanogaster LD29276p pro...    29   2.8  
AE014297-1857|AAF55064.2|  244|Drosophila melanogaster CG8461-PA...    29   2.8  
BT003203-1|AAO24958.1| 1051|Drosophila melanogaster RE36115p pro...    28   6.5  
AE014298-2160|AAF48462.1|  724|Drosophila melanogaster CG9203-PA...    28   6.5  
AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB...    28   6.5  
AE013599-2224|AAF58038.1| 1051|Drosophila melanogaster CG15701-P...    28   6.5  
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro...    28   8.6  
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA...    28   8.6  

>AY070784-1|AAL48406.1|  144|Drosophila melanogaster AT12494p
           protein.
          Length = 144

 Score =  188 bits (459), Expect = 3e-48
 Identities = 87/144 (60%), Positives = 105/144 (72%)
 Frame = +3

Query: 42  MAQIPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKAN 221
           MAQ+PL + +H ++VCSLYKRALRNLE++YDRR+VYRY+AV LR RFD++ +  ++ +  
Sbjct: 1   MAQVPLAIVSHKRQVCSLYKRALRNLESWYDRRNVYRYRAVQLRARFDEN-RSKDLGEGI 59

Query: 222 XXXXXXXXXXXXXQHPIPKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKRE 401
                        +H  P+ FA S GG A ER V PPDWVLDYWHPLEKAQYPEYF KRE
Sbjct: 60  RLLACGQRELFETRHFQPRNFANSAGGCAFEREVIPPDWVLDYWHPLEKAQYPEYFAKRE 119

Query: 402 QRKKEFVAMWEKEYGKPDEKDKHH 473
           QRKKEFV  WEK+YGKPD KD  H
Sbjct: 120 QRKKEFVTWWEKQYGKPDPKDLGH 143


>AE014134-2336|AAF53290.1|  144|Drosophila melanogaster CG9306-PA
           protein.
          Length = 144

 Score =  188 bits (459), Expect = 3e-48
 Identities = 87/144 (60%), Positives = 105/144 (72%)
 Frame = +3

Query: 42  MAQIPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERFDKHAKETNMIKAN 221
           MAQ+PL + +H ++VCSLYKRALRNLE++YDRR+VYRY+AV LR RFD++ +  ++ +  
Sbjct: 1   MAQVPLAIVSHKRQVCSLYKRALRNLESWYDRRNVYRYRAVQLRARFDEN-RSKDLGEGI 59

Query: 222 XXXXXXXXXXXXXQHPIPKYFATSPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKRE 401
                        +H  P+ FA S GG A ER V PPDWVLDYWHPLEKAQYPEYF KRE
Sbjct: 60  RLLACGQRELFETRHFQPRNFANSAGGCAFEREVIPPDWVLDYWHPLEKAQYPEYFAKRE 119

Query: 402 QRKKEFVAMWEKEYGKPDEKDKHH 473
           QRKKEFV  WEK+YGKPD KD  H
Sbjct: 120 QRKKEFVTWWEKQYGKPDPKDLGH 143


>AY061371-1|AAL28919.1|  244|Drosophila melanogaster LD29276p
           protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 372 QYPEYFKKREQRKKEFVAMWEK 437
           Q P Y  K+E+R KE VA +EK
Sbjct: 194 QQPHYLTKKERRAKELVAQFEK 215


>AE014297-1857|AAF55064.2|  244|Drosophila melanogaster CG8461-PA
           protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 372 QYPEYFKKREQRKKEFVAMWEK 437
           Q P Y  K+E+R KE VA +EK
Sbjct: 194 QQPHYLTKKERRAKELVAQFEK 215


>BT003203-1|AAO24958.1| 1051|Drosophila melanogaster RE36115p
           protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 330 PDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH 473
           P+ VLD +H +  A  P+  + + +++KE      KEY    +  K H
Sbjct: 125 PNAVLDTYHSVTVASPPQKRRGQAEQEKESPTPSSKEYSPVAQTQKEH 172


>AE014298-2160|AAF48462.1|  724|Drosophila melanogaster CG9203-PA
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 376 ILNISRNASKERKSSLLCGRRSMASQMRKISIIRQIV 486
           I+N+  ++S E +  +  GR++M SQ R   I RQ++
Sbjct: 472 IVNLVESSSDEEEMKMPAGRKTMTSQERTQIIKRQVM 508


>AE014296-2636|AAO41247.1|  884|Drosophila melanogaster CG5215-PB,
           isoform B protein.
          Length = 884

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 24/32 (75%)
 Frame = -2

Query: 425 SNELFLSLLAFLEIFRILGFLKRMPIVQDPIR 330
           S +LFL  +AF +I+++LG ++ +P ++ P+R
Sbjct: 804 SAQLFLRYIAFRQIYKVLG-MEPLPAMKFPMR 834


>AE013599-2224|AAF58038.1| 1051|Drosophila melanogaster CG15701-PA
           protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 330 PDWVLDYWHPLEKAQYPEYFKKREQRKKEFVAMWEKEYGKPDEKDKHH 473
           P+ VLD +H +  A  P+  + + +++KE      KEY    +  K H
Sbjct: 125 PNAVLDTYHSVTVASPPQKRRGQAEQEKESPTPSSKEYSPVAQTQKEH 172


>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p protein.
          Length = 1718

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +3

Query: 3    LASASLSVVKTIKMAQIPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERF 182
            L+  + +  +T+K       +K   ++ CSL +R+ + LE   ++  VY     + R  F
Sbjct: 1500 LSEMTRNADQTLKALSDEAAIKDQRRRSCSLQRRSAKPLETIDEKVKVYPQSMGVARGTF 1559

Query: 183  DKHAKETN 206
               A+  +
Sbjct: 1560 ASEARRNS 1567


>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
            protein.
          Length = 1857

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +3

Query: 3    LASASLSVVKTIKMAQIPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRERF 182
            L+  + +  +T+K       +K   ++ CSL +R+ + LE   ++  VY     + R  F
Sbjct: 1339 LSEMTRNADQTLKALSDEAAIKDQRRRSCSLQRRSAKPLETIDEKVKVYPQSMGVARGTF 1398

Query: 183  DKHAKETN 206
               A+  +
Sbjct: 1399 ASEARRNS 1406


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,206,456
Number of Sequences: 53049
Number of extensions: 439573
Number of successful extensions: 1091
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)