Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m11f
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-49|AAN13301.1|  202|Drosophila melanogaster CG9791-PB, ...   162   3e-40
AE014297-48|AAF52149.2|  758|Drosophila melanogaster CG9791-PA, ...   162   3e-40

>AE014297-49|AAN13301.1|  202|Drosophila melanogaster CG9791-PB,
           isoform B protein.
          Length = 202

 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/128 (60%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
 Frame = +1

Query: 187 LVRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLAS 366
           L   KK + N S LF PV V    D  ++G E +G+L+K +LLKILNKF Q+ EI+ L +
Sbjct: 39  LFSRKKPETNLSTLFKPVQVHAYVDSEDVGSELSGKLEKAELLKILNKFTQRREIKSLCN 98

Query: 367 ENGLDDQLLHQAFLSFRRHCLE-HDLPPDLHITISDILQGAGHVDDLFPYFLRHARRAFP 543
           ENGLDD L  QAF SFRR C+E  +LP DLHIT SDI QGAGH+DD+FPYFLRHA+  FP
Sbjct: 99  ENGLDDYLQQQAFGSFRRFCIEAENLPVDLHITFSDITQGAGHIDDIFPYFLRHAKTVFP 158

Query: 544 HLDCLEDL 567
           HLDC++DL
Sbjct: 159 HLDCMDDL 166


>AE014297-48|AAF52149.2|  758|Drosophila melanogaster CG9791-PA,
           isoform A protein.
          Length = 758

 Score =  162 bits (393), Expect = 3e-40
 Identities = 77/128 (60%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
 Frame = +1

Query: 187 LVRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLAS 366
           L   KK + N S LF PV V    D  ++G E +G+L+K +LLKILNKF Q+ EI+ L +
Sbjct: 39  LFSRKKPETNLSTLFKPVQVHAYVDSEDVGSELSGKLEKAELLKILNKFTQRREIKSLCN 98

Query: 367 ENGLDDQLLHQAFLSFRRHCLE-HDLPPDLHITISDILQGAGHVDDLFPYFLRHARRAFP 543
           ENGLDD L  QAF SFRR C+E  +LP DLHIT SDI QGAGH+DD+FPYFLRHA+  FP
Sbjct: 99  ENGLDDYLQQQAFGSFRRFCIEAENLPVDLHITFSDITQGAGHIDDIFPYFLRHAKTVFP 158

Query: 544 HLDCLEDL 567
           HLDC++DL
Sbjct: 159 HLDCMDDL 166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,510,867
Number of Sequences: 53049
Number of extensions: 507161
Number of successful extensions: 1449
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)