Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11m11f
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 85 3e-17
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 30 1.0
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 30 1.0
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 30 1.0
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 29 1.8
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 29 1.8
Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 28 4.1
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 4.1
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical... 27 9.4
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Frame = +1
Query: 280 EFTGRLKKQDLLKILNKFYQKPEIRVLASENGLDDQLLHQAFLSFRRHCLEHDL---PPD 450
E+ G L ++ L++F ++P +R LA ENG++D+L ++F SFR +C DL P
Sbjct: 68 EWIGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFREYCTPEDLNSVDPG 127
Query: 451 LHITISDILQGAGHVDDLFPYFLRHARRAFPHLDCLEDL 567
L I +SDI +G + L+P+FL HA++ FPHL+ ++DL
Sbjct: 128 LLILLSDISKGTKDCEMLYPFFLDHAKQVFPHLEAMDDL 166
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Frame = +1
Query: 280 EFTGRLKKQDLLKILNKFYQKPEIRVLASENGLDDQLLHQAFLSFRRHCLEHDL---PPD 450
E+ G L ++ L++F ++P +R LA ENG++D+L ++F SFR +C DL P
Sbjct: 70 EWIGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFREYCTPEDLNSVDPG 129
Query: 451 LHITISDILQGAGHVDDLFPYFLRHARRAFPHLDCLEDL 567
L I +SDI +G + L+P+FL HA++ FPHL+ ++DL
Sbjct: 130 LLILLSDISKGTKDCEMLYPFFLDHAKQVFPHLEAMDDL 168
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +1
Query: 184 ILVRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLA 363
I + +H +N ALF + +K + + + E T + +K D+L + + KP + L
Sbjct: 894 IPIECGRHQQNQLALF-KILIKLSKEFNKVDEFLTQKNEKDDVLIVQAIMFDKPNVVELI 952
Query: 364 SENGLDDQLLHQAFLSFRRHCLE 432
+ + L+H + + + LE
Sbjct: 953 LDTASEMHLIHGTHNAIKENELE 975
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +1
Query: 184 ILVRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLA 363
I + +H +N ALF + +K + + + E T + +K D+L + + KP + L
Sbjct: 932 IPIECGRHQQNQLALF-KILIKLSKEFNKVDEFLTQKNEKDDVLIVQAIMFDKPNVVELI 990
Query: 364 SENGLDDQLLHQAFLSFRRHCLE 432
+ + L+H + + + LE
Sbjct: 991 LDTASEMHLIHGTHNAIKENELE 1013
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +1
Query: 184 ILVRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLA 363
I + +H +N ALF + +K + + + E T + +K D+L + + KP + L
Sbjct: 894 IPIECGRHQQNQLALF-KILIKLSKEFNKVDEFLTQKNEKDDVLIVQAIMFDKPNVVELI 952
Query: 364 SENGLDDQLLHQAFLSFRRHCLE 432
+ + L+H + + + LE
Sbjct: 953 LDTASEMHLIHGTHNAIKENELE 975
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 13 TKTT*ILSQFTFIYFKMYKGFSRILALHNVEKLQLNVSNLRC 138
TK T ++S+F I+F+ + GF + L + N N RC
Sbjct: 1170 TKMTALVSKFRTIFFQQFGGFQEVCTLLPDAYNESNFFNFRC 1211
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 13 TKTT*ILSQFTFIYFKMYKGFSRILALHNVEKLQLNVSNLRC 138
TK T ++S+F I+F+ + GF + L + N N RC
Sbjct: 1170 TKMTALVSKFRTIFFQQFGGFQEVCTLLPDAYNESNFFNFRC 1211
>Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical
protein F19H8.2 protein.
Length = 303
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 394 HQAFLSFRRHCLEHDLPPDLHITISDILQGAGHV 495
H A +FRRHC +++L P++ + S + + HV
Sbjct: 172 HYACKTFRRHCRKYNL-PEIEVNNSTLTSNSTHV 204
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/99 (22%), Positives = 46/99 (46%)
Frame = +1
Query: 82 ILALHNVEKLQLNVSNLRCNILCARKLKPAGIGYILVRTKKHDRNPSALFVPVPVKPNSD 261
+L + + K+Q++ + N+L +++ G +L T +RN P+ D
Sbjct: 614 LLGIDSTNKMQMDEHRVNENLLPEKRVYKIGQNVVLFNTLSRNRNE-------PICIQVD 666
Query: 262 DINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLASENGL 378
++ G E +KKQ + ++ Y + E + L +NG+
Sbjct: 667 SLDAGVEADPPIKKQQVSPVI--AYDE-EKKTLVVKNGI 702
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/99 (22%), Positives = 46/99 (46%)
Frame = +1
Query: 82 ILALHNVEKLQLNVSNLRCNILCARKLKPAGIGYILVRTKKHDRNPSALFVPVPVKPNSD 261
+L + + K+Q++ + N+L +++ G +L T +RN P+ D
Sbjct: 612 LLGIDSTNKMQMDEHRVNENLLPEKRVYKIGQNVVLFNTLSRNRNE-------PICIQVD 664
Query: 262 DINIGEEFTGRLKKQDLLKILNKFYQKPEIRVLASENGL 378
++ G E +KKQ + ++ Y + E + L +NG+
Sbjct: 665 SLDAGVEADPPIKKQQVSPVI--AYDE-EKKTLVVKNGI 700
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 190 VRTKKHDRNPSALFVPVPVKPNSDDINIGEEFTGRLKKQDLLKILNKFYQKPEI 351
++ +K + ++ +P P P + + E + LK D K+LNK PE+
Sbjct: 115 IQVQKVESTQASAPIPAPAAPTTQKSSPKERKSVNLKDLDQKKVLNKLSGLPEL 168
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 436 DLPPDLHITISDILQGAGHVDDLFPYFLRHARRAFPHLDCLED 564
DL L++ +S++ G +++ F +LR R FP L L D
Sbjct: 883 DLVQQLNLELSELEVLFGRMENGFHAYLRKKRAVFPRLFALSD 925
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 436 DLPPDLHITISDILQGAGHVDDLFPYFLRHARRAFPHLDCLED 564
DL L++ +S++ G +++ F +LR R FP L L D
Sbjct: 883 DLVQQLNLELSELEVLFGRMENGFHAYLRKKRAVFPRLFALSD 925
>AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical
protein Y38H6C.21 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 291 SCKFFTNVYVIGVWFHWHWHK*SRRIPIMFFSSYQNITY 175
+C F + G F++H +K RR+P +FSS ++ Y
Sbjct: 160 NCILFAMTIITGS-FYFHIYKLFRRLPSTYFSSKIHLLY 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,958,770
Number of Sequences: 27780
Number of extensions: 272270
Number of successful extensions: 661
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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