Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11m11f
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            23   1.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.6  

>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 365 QKMDWMINCYIKLSFHSDGIV*NMIYHQTYIL 460
           Q M W ++C IK   H+  I  +M +  T +L
Sbjct: 19  QMMIWALDCSIKPKDHNGSIYWSMYHLCTVVL 50


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 246 HWHWH 232
           HWHWH
Sbjct: 209 HWHWH 213


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 73  FSRILALHNVEKLQLNVSNLRCNILCA 153
           F  +  LH +E ++ NV  L  N LC+
Sbjct: 143 FLGLRELHTLEIVESNVQALPVNSLCS 169


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 213 PIMFFSSYQNITYTG 169
           P++F SS +NI+  G
Sbjct: 181 PVLFISSLENISLNG 195


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 213 PIMFFSSYQNITYTG 169
           P++F SS +NI+  G
Sbjct: 219 PVLFISSLENISLNG 233


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 79  RILALHNVEKLQLNVSNL 132
           +I+ LHN     LN+SNL
Sbjct: 20  KIIGLHNNMCTSLNLSNL 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,840
Number of Sequences: 438
Number of extensions: 2833
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)